Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.57■■■□□ 2
Shisa4Q8CA71 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Shisa4Q8CA71 Gm11599-201ENSMUST00000118720 878 ntBASIC27.56■■■□□ 2
Shisa4Q8CA71 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.55■■■□□ 2
Shisa4Q8CA71 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Shisa4Q8CA71 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Shisa4Q8CA71 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.53■■■□□ 2
Shisa4Q8CA71 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Shisa4Q8CA71 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.51■■□□□ 1.99
Shisa4Q8CA71 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Shisa4Q8CA71 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Shisa4Q8CA71 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Shisa4Q8CA71 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Shisa4Q8CA71 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.49■■□□□ 1.99
Shisa4Q8CA71 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.48■■□□□ 1.99
Shisa4Q8CA71 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Shisa4Q8CA71 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Shisa4Q8CA71 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Shisa4Q8CA71 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Shisa4Q8CA71 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Shisa4Q8CA71 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Shisa4Q8CA71 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Shisa4Q8CA71 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Shisa4Q8CA71 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Shisa4Q8CA71 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Shisa4Q8CA71 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Shisa4Q8CA71 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Shisa4Q8CA71 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Shisa4Q8CA71 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Shisa4Q8CA71 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Shisa4Q8CA71 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.43■■□□□ 1.98
Shisa4Q8CA71 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Shisa4Q8CA71 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Shisa4Q8CA71 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.42■■□□□ 1.98
Shisa4Q8CA71 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.41■■□□□ 1.98
Shisa4Q8CA71 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.41■■□□□ 1.98
Shisa4Q8CA71 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.41■■□□□ 1.98
Shisa4Q8CA71 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Shisa4Q8CA71 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
Shisa4Q8CA71 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Shisa4Q8CA71 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Shisa4Q8CA71 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Shisa4Q8CA71 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shisa4Q8CA71 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Shisa4Q8CA71 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Shisa4Q8CA71 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
Shisa4Q8CA71 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Shisa4Q8CA71 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Shisa4Q8CA71 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
Shisa4Q8CA71 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Shisa4Q8CA71 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Shisa4Q8CA71 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Shisa4Q8CA71 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Shisa4Q8CA71 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Shisa4Q8CA71 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Shisa4Q8CA71 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
Shisa4Q8CA71 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Shisa4Q8CA71 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Shisa4Q8CA71 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
Shisa4Q8CA71 Mir6538-201ENSMUST00000183713 110 ntBASIC27.31■■□□□ 1.96
Shisa4Q8CA71 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Shisa4Q8CA71 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Shisa4Q8CA71 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Shisa4Q8CA71 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Shisa4Q8CA71 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Shisa4Q8CA71 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Shisa4Q8CA71 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Shisa4Q8CA71 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Shisa4Q8CA71 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Shisa4Q8CA71 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Shisa4Q8CA71 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Shisa4Q8CA71 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Shisa4Q8CA71 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.23■■□□□ 1.95
Shisa4Q8CA71 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Shisa4Q8CA71 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Shisa4Q8CA71 Gm11175-201ENSMUST00000116172 543 ntBASIC27.22■■□□□ 1.95
Shisa4Q8CA71 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.22■■□□□ 1.95
Shisa4Q8CA71 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Shisa4Q8CA71 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Shisa4Q8CA71 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Shisa4Q8CA71 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.21■■□□□ 1.95
Shisa4Q8CA71 Gm45364-201ENSMUST00000210883 159 ntBASIC27.21■■□□□ 1.95
Shisa4Q8CA71 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.21■■□□□ 1.95
Shisa4Q8CA71 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.21■■□□□ 1.95
Shisa4Q8CA71 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Shisa4Q8CA71 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Shisa4Q8CA71 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Shisa4Q8CA71 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Shisa4Q8CA71 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.2■■□□□ 1.94
Shisa4Q8CA71 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Shisa4Q8CA71 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Shisa4Q8CA71 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Shisa4Q8CA71 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Shisa4Q8CA71 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Shisa4Q8CA71 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Shisa4Q8CA71 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Shisa4Q8CA71 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Shisa4Q8CA71 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.17■■□□□ 1.94
Shisa4Q8CA71 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Shisa4Q8CA71 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms