Protein–RNA interactions for Protein: Q8C8M1

Sinhcaf, SIN3-HDAC complex-associated factor, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SinhcafQ8C8M1 Mir3960-201ENSMUST00000198213 73 ntBASIC22.34■■□□□ 1.17
SinhcafQ8C8M1 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.34■■□□□ 1.17
SinhcafQ8C8M1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SinhcafQ8C8M1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SinhcafQ8C8M1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.33■■□□□ 1.17
SinhcafQ8C8M1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SinhcafQ8C8M1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SinhcafQ8C8M1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SinhcafQ8C8M1 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.32■■□□□ 1.16
SinhcafQ8C8M1 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.32■■□□□ 1.16
SinhcafQ8C8M1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SinhcafQ8C8M1 Gm45364-201ENSMUST00000210883 159 ntBASIC22.31■■□□□ 1.16
SinhcafQ8C8M1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SinhcafQ8C8M1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SinhcafQ8C8M1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SinhcafQ8C8M1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SinhcafQ8C8M1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SinhcafQ8C8M1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SinhcafQ8C8M1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SinhcafQ8C8M1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SinhcafQ8C8M1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SinhcafQ8C8M1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SinhcafQ8C8M1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.28■■□□□ 1.16
SinhcafQ8C8M1 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.27■■□□□ 1.16
SinhcafQ8C8M1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SinhcafQ8C8M1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SinhcafQ8C8M1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SinhcafQ8C8M1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SinhcafQ8C8M1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SinhcafQ8C8M1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SinhcafQ8C8M1 Mir6538-201ENSMUST00000183713 110 ntBASIC22.23■■□□□ 1.15
SinhcafQ8C8M1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SinhcafQ8C8M1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SinhcafQ8C8M1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SinhcafQ8C8M1 Scarna2-201ENSMUST00000157560 414 ntBASIC22.21■■□□□ 1.15
SinhcafQ8C8M1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SinhcafQ8C8M1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SinhcafQ8C8M1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SinhcafQ8C8M1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SinhcafQ8C8M1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SinhcafQ8C8M1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SinhcafQ8C8M1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SinhcafQ8C8M1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SinhcafQ8C8M1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SinhcafQ8C8M1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SinhcafQ8C8M1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SinhcafQ8C8M1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.18■■□□□ 1.14
SinhcafQ8C8M1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.17■■□□□ 1.14
SinhcafQ8C8M1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SinhcafQ8C8M1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.17■■□□□ 1.14
SinhcafQ8C8M1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SinhcafQ8C8M1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
SinhcafQ8C8M1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.16■■□□□ 1.14
SinhcafQ8C8M1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Gm9806-201ENSMUST00000051080 552 ntBASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Gm9812-201ENSMUST00000061934 968 ntBASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SinhcafQ8C8M1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.14■■□□□ 1.14
SinhcafQ8C8M1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SinhcafQ8C8M1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SinhcafQ8C8M1 Gm16437-201ENSMUST00000025669 507 ntBASIC22.14■■□□□ 1.13
SinhcafQ8C8M1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SinhcafQ8C8M1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SinhcafQ8C8M1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SinhcafQ8C8M1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SinhcafQ8C8M1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SinhcafQ8C8M1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SinhcafQ8C8M1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SinhcafQ8C8M1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SinhcafQ8C8M1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.11■■□□□ 1.13
SinhcafQ8C8M1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SinhcafQ8C8M1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.11■■□□□ 1.13
SinhcafQ8C8M1 Gm11687-201ENSMUST00000118911 886 ntBASIC22.1■■□□□ 1.13
SinhcafQ8C8M1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms