Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cfap54Q8C6S9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Cfap54Q8C6S9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.99■■□□□ 1.27
Cfap54Q8C6S9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.99■■□□□ 1.27
Cfap54Q8C6S9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Cfap54Q8C6S9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Cfap54Q8C6S9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.97■■□□□ 1.27
Cfap54Q8C6S9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.97■■□□□ 1.27
Cfap54Q8C6S9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 Gm5921-201ENSMUST00000075898 882 ntBASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap54Q8C6S9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cfap54Q8C6S9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cfap54Q8C6S9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.95■■□□□ 1.26
Cfap54Q8C6S9 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.95■■□□□ 1.26
Cfap54Q8C6S9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cfap54Q8C6S9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.94■■□□□ 1.26
Cfap54Q8C6S9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Mir3960-201ENSMUST00000198213 73 ntBASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cfap54Q8C6S9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cfap54Q8C6S9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cfap54Q8C6S9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cfap54Q8C6S9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.92■■□□□ 1.26
Cfap54Q8C6S9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cfap54Q8C6S9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cfap54Q8C6S9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.91■■□□□ 1.26
Cfap54Q8C6S9 Gm10420-201ENSMUST00000121713 882 ntBASIC22.9■■□□□ 1.26
Cfap54Q8C6S9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cfap54Q8C6S9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.89■■□□□ 1.26
Cfap54Q8C6S9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.89■■□□□ 1.26
Cfap54Q8C6S9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap54Q8C6S9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap54Q8C6S9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cfap54Q8C6S9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Cfap54Q8C6S9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.88■■□□□ 1.25
Cfap54Q8C6S9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cfap54Q8C6S9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cfap54Q8C6S9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.87■■□□□ 1.25
Cfap54Q8C6S9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap54Q8C6S9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.86■■□□□ 1.25
Cfap54Q8C6S9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cfap54Q8C6S9 Gm15546-201ENSMUST00000122095 826 ntBASIC22.86■■□□□ 1.25
Cfap54Q8C6S9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cfap54Q8C6S9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Cfap54Q8C6S9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap54Q8C6S9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cfap54Q8C6S9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Cfap54Q8C6S9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Cfap54Q8C6S9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cfap54Q8C6S9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.83■■□□□ 1.25
Cfap54Q8C6S9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Cfap54Q8C6S9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cfap54Q8C6S9 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.82■■□□□ 1.24
Cfap54Q8C6S9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cfap54Q8C6S9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cfap54Q8C6S9 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.81■■□□□ 1.24
Cfap54Q8C6S9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Cfap54Q8C6S9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cfap54Q8C6S9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cfap54Q8C6S9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Cfap54Q8C6S9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cfap54Q8C6S9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cfap54Q8C6S9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.78■■□□□ 1.24
Cfap54Q8C6S9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cfap54Q8C6S9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cfap54Q8C6S9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cfap54Q8C6S9 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.77■■□□□ 1.24
Cfap54Q8C6S9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Cfap54Q8C6S9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Cfap54Q8C6S9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.76■■□□□ 1.23
Cfap54Q8C6S9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cfap54Q8C6S9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.75■■□□□ 1.23
Cfap54Q8C6S9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.75■■□□□ 1.23
Cfap54Q8C6S9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap54Q8C6S9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap54Q8C6S9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.74■■□□□ 1.23
Cfap54Q8C6S9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap54Q8C6S9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.74■■□□□ 1.23
Cfap54Q8C6S9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.74■■□□□ 1.23
Cfap54Q8C6S9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cfap54Q8C6S9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cfap54Q8C6S9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cfap54Q8C6S9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.72■■□□□ 1.23
Cfap54Q8C6S9 Gm37136-201ENSMUST00000194368 194 ntBASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms