Protein–RNA interactions for Protein: Q8C3L1

Ssuh2, Protein SSUH2 homolog, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssuh2Q8C3L1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21,42■■□□□ 1,02
Ssuh2Q8C3L1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21,41■■□□□ 1,02
Ssuh2Q8C3L1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Ssuh2Q8C3L1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21,41■■□□□ 1,02
Ssuh2Q8C3L1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21,41■■□□□ 1,02
Ssuh2Q8C3L1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Ssuh2Q8C3L1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21,4■■□□□ 1,02
Ssuh2Q8C3L1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Ssuh2Q8C3L1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21,4■■□□□ 1,02
Ssuh2Q8C3L1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21,4■■□□□ 1,02
Ssuh2Q8C3L1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21,4■■□□□ 1,02
Ssuh2Q8C3L1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,02
Ssuh2Q8C3L1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Ssuh2Q8C3L1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21,39■■□□□ 1,01
Ssuh2Q8C3L1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Ssuh2Q8C3L1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21,39■■□□□ 1,01
Ssuh2Q8C3L1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21,39■■□□□ 1,01
Ssuh2Q8C3L1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21,38■■□□□ 1,01
Ssuh2Q8C3L1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Ssuh2Q8C3L1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Ssuh2Q8C3L1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21,37■■□□□ 1,01
Ssuh2Q8C3L1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21,36■■□□□ 1,01
Ssuh2Q8C3L1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21,36■■□□□ 1,01
Ssuh2Q8C3L1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Ssuh2Q8C3L1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21,35■■□□□ 1,01
Ssuh2Q8C3L1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Ssuh2Q8C3L1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21,34■■□□□ 1,01
Ssuh2Q8C3L1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21,34■■□□□ 1,01
Ssuh2Q8C3L1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21,32■■□□□ 1
Ssuh2Q8C3L1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21,32■■□□□ 1
Ssuh2Q8C3L1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Ssuh2Q8C3L1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Ssuh2Q8C3L1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21,32■■□□□ 1
Ssuh2Q8C3L1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Ssuh2Q8C3L1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21,31■■□□□ 1
Ssuh2Q8C3L1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Ssuh2Q8C3L1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Ssuh2Q8C3L1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21,31■■□□□ 1
Ssuh2Q8C3L1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21,3■■□□□ 1
Ssuh2Q8C3L1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21,29■■□□□ 1
Ssuh2Q8C3L1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21,29■■□□□ 1
Ssuh2Q8C3L1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21,29■■□□□ 1
Ssuh2Q8C3L1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21,29■■□□□ 1
Ssuh2Q8C3L1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Gm12366-201ENSMUST00000121722 873 ntBASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Gm5786-201ENSMUST00000085368 882 ntBASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ssuh2Q8C3L1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Ssuh2Q8C3L1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21,27■□□□□ 0,99
Ssuh2Q8C3L1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Ssuh2Q8C3L1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Ssuh2Q8C3L1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Ssuh2Q8C3L1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21,26■□□□□ 0,99
Ssuh2Q8C3L1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21,26■□□□□ 0,99
Ssuh2Q8C3L1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21,25■□□□□ 0,99
Ssuh2Q8C3L1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21,25■□□□□ 0,99
Ssuh2Q8C3L1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Ssuh2Q8C3L1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Ssuh2Q8C3L1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Ssuh2Q8C3L1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Ssuh2Q8C3L1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Ssuh2Q8C3L1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Ssuh2Q8C3L1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Ssuh2Q8C3L1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Ssuh2Q8C3L1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21,23■□□□□ 0,99
Ssuh2Q8C3L1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21,23■□□□□ 0,99
Ssuh2Q8C3L1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssuh2Q8C3L1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssuh2Q8C3L1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssuh2Q8C3L1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssuh2Q8C3L1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssuh2Q8C3L1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssuh2Q8C3L1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21,22■□□□□ 0,99
Ssuh2Q8C3L1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Ssuh2Q8C3L1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21,21■□□□□ 0,99
Ssuh2Q8C3L1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Ssuh2Q8C3L1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Ssuh2Q8C3L1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21,2■□□□□ 0,98
Ssuh2Q8C3L1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Ssuh2Q8C3L1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21,2■□□□□ 0,98
Ssuh2Q8C3L1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
Ssuh2Q8C3L1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21,19■□□□□ 0,98
Ssuh2Q8C3L1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Ssuh2Q8C3L1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21,18■□□□□ 0,98
Ssuh2Q8C3L1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21,18■□□□□ 0,98
Ssuh2Q8C3L1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21,18■□□□□ 0,98
Ssuh2Q8C3L1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Ssuh2Q8C3L1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21,17■□□□□ 0,98
Ssuh2Q8C3L1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21,17■□□□□ 0,98
Ssuh2Q8C3L1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Ssuh2Q8C3L1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21,16■□□□□ 0,98
Ssuh2Q8C3L1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21,16■□□□□ 0,98
Ssuh2Q8C3L1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Retrieved 100 of 76,532 protein–RNA pairs in 10,6 ms