Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Cps1Q8C196 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Cps1Q8C196 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Cps1Q8C196 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC32.71■■■□□ 2.83
Cps1Q8C196 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Cps1Q8C196 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Cps1Q8C196 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC32.68■■■□□ 2.82
Cps1Q8C196 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Cps1Q8C196 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cps1Q8C196 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cps1Q8C196 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cps1Q8C196 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cps1Q8C196 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cps1Q8C196 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC32.66■■■□□ 2.82
Cps1Q8C196 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
Cps1Q8C196 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cps1Q8C196 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC32.65■■■□□ 2.82
Cps1Q8C196 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cps1Q8C196 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cps1Q8C196 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
Cps1Q8C196 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
Cps1Q8C196 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cps1Q8C196 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cps1Q8C196 Gm9910-201ENSMUST00000195385 1550 ntBASIC32.62■■■□□ 2.81
Cps1Q8C196 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cps1Q8C196 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cps1Q8C196 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cps1Q8C196 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC32.61■■■□□ 2.81
Cps1Q8C196 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cps1Q8C196 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cps1Q8C196 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
Cps1Q8C196 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cps1Q8C196 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Cps1Q8C196 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Cps1Q8C196 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Cps1Q8C196 Gm9812-201ENSMUST00000061934 968 ntBASIC32.58■■■□□ 2.81
Cps1Q8C196 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Cps1Q8C196 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
Cps1Q8C196 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
Cps1Q8C196 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC32.56■■■□□ 2.8
Cps1Q8C196 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC32.56■■■□□ 2.8
Cps1Q8C196 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cps1Q8C196 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Cps1Q8C196 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC32.54■■■□□ 2.8
Cps1Q8C196 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Cps1Q8C196 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Cps1Q8C196 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cps1Q8C196 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Cps1Q8C196 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cps1Q8C196 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC32.52■■■□□ 2.8
Cps1Q8C196 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC32.51■■■□□ 2.8
Cps1Q8C196 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
Cps1Q8C196 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
Cps1Q8C196 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC32.51■■■□□ 2.79
Cps1Q8C196 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
Cps1Q8C196 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC32.49■■■□□ 2.79
Cps1Q8C196 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Cps1Q8C196 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Cps1Q8C196 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Cps1Q8C196 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC32.46■■■□□ 2.79
Cps1Q8C196 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cps1Q8C196 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cps1Q8C196 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC32.46■■■□□ 2.79
Cps1Q8C196 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Cps1Q8C196 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cps1Q8C196 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
Cps1Q8C196 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Cps1Q8C196 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Cps1Q8C196 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Cps1Q8C196 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC32.43■■■□□ 2.78
Cps1Q8C196 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC32.42■■■□□ 2.78
Cps1Q8C196 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Cps1Q8C196 Gm14121-201ENSMUST00000121441 1380 ntBASIC32.42■■■□□ 2.78
Cps1Q8C196 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Cps1Q8C196 Gm10420-201ENSMUST00000121713 882 ntBASIC32.41■■■□□ 2.78
Cps1Q8C196 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Cps1Q8C196 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC32.41■■■□□ 2.78
Cps1Q8C196 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Cps1Q8C196 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Cps1Q8C196 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
Cps1Q8C196 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Cps1Q8C196 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Cps1Q8C196 AC153911.1-201ENSMUST00000220378 758 ntBASIC32.38■■■□□ 2.77
Cps1Q8C196 Zxda-201ENSMUST00000117281 2621 ntBASIC32.37■■■□□ 2.77
Cps1Q8C196 Gm5067-201ENSMUST00000170449 1009 ntBASIC32.36■■■□□ 2.77
Cps1Q8C196 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Cps1Q8C196 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Cps1Q8C196 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Cps1Q8C196 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC32.34■■■□□ 2.77
Cps1Q8C196 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC32.34■■■□□ 2.77
Cps1Q8C196 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Cps1Q8C196 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
Cps1Q8C196 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Cps1Q8C196 Gm5812-201ENSMUST00000061073 957 ntBASIC32.33■■■□□ 2.77
Cps1Q8C196 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Cps1Q8C196 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC32.31■■■□□ 2.76
Cps1Q8C196 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Cps1Q8C196 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC32.31■■■□□ 2.76
Cps1Q8C196 Gm5921-201ENSMUST00000075898 882 ntBASIC32.31■■■□□ 2.76
Cps1Q8C196 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms