Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Tnfsfm13Q8BXS2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Tnfsfm13Q8BXS2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsfm13Q8BXS2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tnfsfm13Q8BXS2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Tnfsfm13Q8BXS2 Nkain2-201ENSMUST00000092602 558 ntBASIC20.6■□□□□ 0.89
Tnfsfm13Q8BXS2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsfm13Q8BXS2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsfm13Q8BXS2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfsfm13Q8BXS2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfsfm13Q8BXS2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsfm13Q8BXS2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsfm13Q8BXS2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tnfsfm13Q8BXS2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsfm13Q8BXS2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Tnfsfm13Q8BXS2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Tnfsfm13Q8BXS2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.58■□□□□ 0.89
Tnfsfm13Q8BXS2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsfm13Q8BXS2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnfsfm13Q8BXS2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Tnfsfm13Q8BXS2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfsfm13Q8BXS2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tnfsfm13Q8BXS2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsfm13Q8BXS2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.56■□□□□ 0.88
Tnfsfm13Q8BXS2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsfm13Q8BXS2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsfm13Q8BXS2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tnfsfm13Q8BXS2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsfm13Q8BXS2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsfm13Q8BXS2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsfm13Q8BXS2 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.54■□□□□ 0.88
Tnfsfm13Q8BXS2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsfm13Q8BXS2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.53■□□□□ 0.88
Tnfsfm13Q8BXS2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsfm13Q8BXS2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsfm13Q8BXS2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsfm13Q8BXS2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.52■□□□□ 0.88
Tnfsfm13Q8BXS2 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.52■□□□□ 0.88
Tnfsfm13Q8BXS2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfsfm13Q8BXS2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnfsfm13Q8BXS2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsfm13Q8BXS2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsfm13Q8BXS2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Tnfsfm13Q8BXS2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsfm13Q8BXS2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfsfm13Q8BXS2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfsfm13Q8BXS2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.49■□□□□ 0.87
Tnfsfm13Q8BXS2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfsfm13Q8BXS2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnfsfm13Q8BXS2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tnfsfm13Q8BXS2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.48■□□□□ 0.87
Tnfsfm13Q8BXS2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Tnfsfm13Q8BXS2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.47■□□□□ 0.87
Tnfsfm13Q8BXS2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfsfm13Q8BXS2 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.47■□□□□ 0.87
Tnfsfm13Q8BXS2 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.47■□□□□ 0.87
Tnfsfm13Q8BXS2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfsfm13Q8BXS2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfsfm13Q8BXS2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfsfm13Q8BXS2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.46■□□□□ 0.87
Tnfsfm13Q8BXS2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfsfm13Q8BXS2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfsfm13Q8BXS2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tnfsfm13Q8BXS2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Gm6821-201ENSMUST00000107540 542 ntBASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsfm13Q8BXS2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsfm13Q8BXS2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsfm13Q8BXS2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.44■□□□□ 0.86
Tnfsfm13Q8BXS2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Tnfsfm13Q8BXS2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsfm13Q8BXS2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsfm13Q8BXS2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsfm13Q8BXS2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tnfsfm13Q8BXS2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsfm13Q8BXS2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfsfm13Q8BXS2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfsfm13Q8BXS2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsfm13Q8BXS2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsfm13Q8BXS2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.41■□□□□ 0.86
Tnfsfm13Q8BXS2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.41■□□□□ 0.86
Tnfsfm13Q8BXS2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsfm13Q8BXS2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsfm13Q8BXS2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsfm13Q8BXS2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Tnfsfm13Q8BXS2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfsfm13Q8BXS2 Particl-201ENSMUST00000205370 1560 ntBASIC20.4■□□□□ 0.86
Tnfsfm13Q8BXS2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfsfm13Q8BXS2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfsfm13Q8BXS2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfsfm13Q8BXS2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.38■□□□□ 0.85
Tnfsfm13Q8BXS2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfsfm13Q8BXS2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfsfm13Q8BXS2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms