Protein–RNA interactions for Protein: Q8BVM9

Phf11a, PHD finger protein 11A, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11aQ8BVM9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Phf11aQ8BVM9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Phf11aQ8BVM9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Phf11aQ8BVM9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Phf11aQ8BVM9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Phf11aQ8BVM9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.61■■□□□ 1.05
Phf11aQ8BVM9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Phf11aQ8BVM9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Phf11aQ8BVM9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Phf11aQ8BVM9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Phf11aQ8BVM9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Phf11aQ8BVM9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Phf11aQ8BVM9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
Phf11aQ8BVM9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Phf11aQ8BVM9 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.58■■□□□ 1.04
Phf11aQ8BVM9 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.58■■□□□ 1.04
Phf11aQ8BVM9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Phf11aQ8BVM9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Phf11aQ8BVM9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.57■■□□□ 1.04
Phf11aQ8BVM9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Phf11aQ8BVM9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.57■■□□□ 1.04
Phf11aQ8BVM9 Gm45855-201ENSMUST00000212546 880 ntBASIC21.57■■□□□ 1.04
Phf11aQ8BVM9 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.57■■□□□ 1.04
Phf11aQ8BVM9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Phf11aQ8BVM9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Phf11aQ8BVM9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Phf11aQ8BVM9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.56■■□□□ 1.04
Phf11aQ8BVM9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Phf11aQ8BVM9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Phf11aQ8BVM9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Phf11aQ8BVM9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Phf11aQ8BVM9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Phf11aQ8BVM9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.53■■□□□ 1.04
Phf11aQ8BVM9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Phf11aQ8BVM9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Phf11aQ8BVM9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Phf11aQ8BVM9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Phf11aQ8BVM9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Phf11aQ8BVM9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Phf11aQ8BVM9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Phf11aQ8BVM9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Phf11aQ8BVM9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Phf11aQ8BVM9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Phf11aQ8BVM9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Phf11aQ8BVM9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Phf11aQ8BVM9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Phf11aQ8BVM9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Phf11aQ8BVM9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Phf11aQ8BVM9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Phf11aQ8BVM9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Phf11aQ8BVM9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Phf11aQ8BVM9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Phf11aQ8BVM9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Phf11aQ8BVM9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Phf11aQ8BVM9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Phf11aQ8BVM9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Phf11aQ8BVM9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Phf11aQ8BVM9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Phf11aQ8BVM9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Phf11aQ8BVM9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Phf11aQ8BVM9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Phf11aQ8BVM9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Phf11aQ8BVM9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Phf11aQ8BVM9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.45■■□□□ 1.02
Phf11aQ8BVM9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Phf11aQ8BVM9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Phf11aQ8BVM9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Phf11aQ8BVM9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.44■■□□□ 1.02
Phf11aQ8BVM9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Phf11aQ8BVM9 Particl-201ENSMUST00000205370 1560 ntBASIC21.43■■□□□ 1.02
Phf11aQ8BVM9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Phf11aQ8BVM9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Phf11aQ8BVM9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Phf11aQ8BVM9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Phf11aQ8BVM9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Phf11aQ8BVM9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Phf11aQ8BVM9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Phf11aQ8BVM9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.4■■□□□ 1.02
Phf11aQ8BVM9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Phf11aQ8BVM9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Phf11aQ8BVM9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Phf11aQ8BVM9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Phf11aQ8BVM9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Phf11aQ8BVM9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.39■■□□□ 1.01
Phf11aQ8BVM9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Phf11aQ8BVM9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.39■■□□□ 1.01
Phf11aQ8BVM9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Phf11aQ8BVM9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Phf11aQ8BVM9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Phf11aQ8BVM9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Phf11aQ8BVM9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Phf11aQ8BVM9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Phf11aQ8BVM9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms