Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn7Q8BUM3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn7Q8BUM3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.63■■□□□ 1.05
Ptpn7Q8BUM3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn7Q8BUM3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn7Q8BUM3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptpn7Q8BUM3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptpn7Q8BUM3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptpn7Q8BUM3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptpn7Q8BUM3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptpn7Q8BUM3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.59■■□□□ 1.05
Ptpn7Q8BUM3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.59■■□□□ 1.05
Ptpn7Q8BUM3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptpn7Q8BUM3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ptpn7Q8BUM3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ptpn7Q8BUM3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ptpn7Q8BUM3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptpn7Q8BUM3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.57■■□□□ 1.04
Ptpn7Q8BUM3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptpn7Q8BUM3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptpn7Q8BUM3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptpn7Q8BUM3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn7Q8BUM3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptpn7Q8BUM3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ptpn7Q8BUM3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptpn7Q8BUM3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ptpn7Q8BUM3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptpn7Q8BUM3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptpn7Q8BUM3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 Particl-201ENSMUST00000205370 1560 ntBASIC21.53■■□□□ 1.04
Ptpn7Q8BUM3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ptpn7Q8BUM3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptpn7Q8BUM3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Ptpn7Q8BUM3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptpn7Q8BUM3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptpn7Q8BUM3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ptpn7Q8BUM3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ptpn7Q8BUM3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptpn7Q8BUM3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptpn7Q8BUM3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptpn7Q8BUM3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ptpn7Q8BUM3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ptpn7Q8BUM3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ptpn7Q8BUM3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptpn7Q8BUM3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptpn7Q8BUM3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptpn7Q8BUM3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptpn7Q8BUM3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptpn7Q8BUM3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ptpn7Q8BUM3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptpn7Q8BUM3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptpn7Q8BUM3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptpn7Q8BUM3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ptpn7Q8BUM3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptpn7Q8BUM3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptpn7Q8BUM3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptpn7Q8BUM3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ptpn7Q8BUM3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptpn7Q8BUM3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.46■■□□□ 1.03
Ptpn7Q8BUM3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptpn7Q8BUM3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptpn7Q8BUM3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.45■■□□□ 1.02
Ptpn7Q8BUM3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ptpn7Q8BUM3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptpn7Q8BUM3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptpn7Q8BUM3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptpn7Q8BUM3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptpn7Q8BUM3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ptpn7Q8BUM3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptpn7Q8BUM3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptpn7Q8BUM3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ptpn7Q8BUM3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ptpn7Q8BUM3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptpn7Q8BUM3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ptpn7Q8BUM3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ptpn7Q8BUM3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
Ptpn7Q8BUM3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptpn7Q8BUM3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptpn7Q8BUM3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ptpn7Q8BUM3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Ptpn7Q8BUM3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ptpn7Q8BUM3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptpn7Q8BUM3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptpn7Q8BUM3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptpn7Q8BUM3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptpn7Q8BUM3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptpn7Q8BUM3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms