Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhlrc1Q8BR37 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.93■□□□□ 0.46
Nhlrc1Q8BR37 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhlrc1Q8BR37 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhlrc1Q8BR37 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nhlrc1Q8BR37 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.93■□□□□ 0.46
Nhlrc1Q8BR37 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Gm11687-201ENSMUST00000118911 886 ntBASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.92■□□□□ 0.46
Nhlrc1Q8BR37 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.91■□□□□ 0.46
Nhlrc1Q8BR37 Gm9806-201ENSMUST00000051080 552 ntBASIC17.91■□□□□ 0.46
Nhlrc1Q8BR37 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhlrc1Q8BR37 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.91■□□□□ 0.46
Nhlrc1Q8BR37 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Scarna2-201ENSMUST00000157560 414 ntBASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.9■□□□□ 0.46
Nhlrc1Q8BR37 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.89■□□□□ 0.45
Nhlrc1Q8BR37 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhlrc1Q8BR37 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.88■□□□□ 0.45
Nhlrc1Q8BR37 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nhlrc1Q8BR37 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Nhlrc1Q8BR37 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nhlrc1Q8BR37 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.87■□□□□ 0.45
Nhlrc1Q8BR37 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Nhlrc1Q8BR37 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhlrc1Q8BR37 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.86■□□□□ 0.45
Nhlrc1Q8BR37 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nhlrc1Q8BR37 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhlrc1Q8BR37 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nhlrc1Q8BR37 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.85■□□□□ 0.45
Nhlrc1Q8BR37 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nhlrc1Q8BR37 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhlrc1Q8BR37 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhlrc1Q8BR37 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nhlrc1Q8BR37 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.84■□□□□ 0.45
Nhlrc1Q8BR37 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhlrc1Q8BR37 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhlrc1Q8BR37 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nhlrc1Q8BR37 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nhlrc1Q8BR37 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhlrc1Q8BR37 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhlrc1Q8BR37 Gm45364-201ENSMUST00000210883 159 ntBASIC17.83■□□□□ 0.44
Nhlrc1Q8BR37 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhlrc1Q8BR37 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nhlrc1Q8BR37 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nhlrc1Q8BR37 Gm16437-201ENSMUST00000025669 507 ntBASIC17.82■□□□□ 0.44
Nhlrc1Q8BR37 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nhlrc1Q8BR37 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Nhlrc1Q8BR37 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nhlrc1Q8BR37 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhlrc1Q8BR37 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nhlrc1Q8BR37 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nhlrc1Q8BR37 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhlrc1Q8BR37 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhlrc1Q8BR37 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nhlrc1Q8BR37 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhlrc1Q8BR37 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhlrc1Q8BR37 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nhlrc1Q8BR37 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.78■□□□□ 0.44
Nhlrc1Q8BR37 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.78■□□□□ 0.44
Nhlrc1Q8BR37 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhlrc1Q8BR37 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nhlrc1Q8BR37 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nhlrc1Q8BR37 Gm9812-201ENSMUST00000061934 968 ntBASIC17.77■□□□□ 0.44
Nhlrc1Q8BR37 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nhlrc1Q8BR37 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nhlrc1Q8BR37 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nhlrc1Q8BR37 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Gm12366-201ENSMUST00000121722 873 ntBASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Gm5786-201ENSMUST00000085368 882 ntBASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhlrc1Q8BR37 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.75■□□□□ 0.43
Nhlrc1Q8BR37 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms