Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
VmacQ8BP01 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.03■■□□□ 1.92
VmacQ8BP01 Gm7432-201ENSMUST00000210343 879 ntBASIC27.03■■□□□ 1.92
VmacQ8BP01 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VmacQ8BP01 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
VmacQ8BP01 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
VmacQ8BP01 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
VmacQ8BP01 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
VmacQ8BP01 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.91
VmacQ8BP01 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
VmacQ8BP01 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
VmacQ8BP01 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27■■□□□ 1.91
VmacQ8BP01 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.99■■□□□ 1.91
VmacQ8BP01 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
VmacQ8BP01 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
VmacQ8BP01 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
VmacQ8BP01 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
VmacQ8BP01 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
VmacQ8BP01 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VmacQ8BP01 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
VmacQ8BP01 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VmacQ8BP01 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.96■■□□□ 1.91
VmacQ8BP01 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VmacQ8BP01 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
VmacQ8BP01 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
VmacQ8BP01 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
VmacQ8BP01 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
VmacQ8BP01 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VmacQ8BP01 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
VmacQ8BP01 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VmacQ8BP01 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.92■■□□□ 1.9
VmacQ8BP01 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VmacQ8BP01 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VmacQ8BP01 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VmacQ8BP01 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
VmacQ8BP01 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
VmacQ8BP01 Gm11599-201ENSMUST00000118720 878 ntBASIC26.91■■□□□ 1.9
VmacQ8BP01 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
VmacQ8BP01 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
VmacQ8BP01 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VmacQ8BP01 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
VmacQ8BP01 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
VmacQ8BP01 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
VmacQ8BP01 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
VmacQ8BP01 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
VmacQ8BP01 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.88■■□□□ 1.89
VmacQ8BP01 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.88■■□□□ 1.89
VmacQ8BP01 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.88■■□□□ 1.89
VmacQ8BP01 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VmacQ8BP01 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VmacQ8BP01 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VmacQ8BP01 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
VmacQ8BP01 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VmacQ8BP01 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VmacQ8BP01 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
VmacQ8BP01 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
VmacQ8BP01 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
VmacQ8BP01 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VmacQ8BP01 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
VmacQ8BP01 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VmacQ8BP01 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
VmacQ8BP01 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
VmacQ8BP01 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
VmacQ8BP01 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
VmacQ8BP01 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
VmacQ8BP01 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.78■■□□□ 1.88
VmacQ8BP01 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
VmacQ8BP01 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VmacQ8BP01 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
VmacQ8BP01 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
VmacQ8BP01 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
VmacQ8BP01 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
VmacQ8BP01 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
VmacQ8BP01 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.73■■□□□ 1.87
VmacQ8BP01 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VmacQ8BP01 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VmacQ8BP01 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VmacQ8BP01 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.72■■□□□ 1.87
VmacQ8BP01 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VmacQ8BP01 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VmacQ8BP01 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
VmacQ8BP01 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.71■■□□□ 1.87
VmacQ8BP01 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VmacQ8BP01 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
VmacQ8BP01 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
VmacQ8BP01 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
VmacQ8BP01 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
VmacQ8BP01 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
VmacQ8BP01 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
VmacQ8BP01 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms