Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clrn3Q8BHH8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clrn3Q8BHH8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Clrn3Q8BHH8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clrn3Q8BHH8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clrn3Q8BHH8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn3Q8BHH8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Clrn3Q8BHH8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn3Q8BHH8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn3Q8BHH8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn3Q8BHH8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn3Q8BHH8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.66■■□□□ 1.06
Clrn3Q8BHH8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.66■■□□□ 1.06
Clrn3Q8BHH8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.66■■□□□ 1.06
Clrn3Q8BHH8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Clrn3Q8BHH8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn3Q8BHH8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn3Q8BHH8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.65■■□□□ 1.06
Clrn3Q8BHH8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clrn3Q8BHH8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.65■■□□□ 1.06
Clrn3Q8BHH8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clrn3Q8BHH8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Clrn3Q8BHH8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clrn3Q8BHH8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clrn3Q8BHH8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Clrn3Q8BHH8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.63■■□□□ 1.05
Clrn3Q8BHH8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clrn3Q8BHH8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clrn3Q8BHH8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Clrn3Q8BHH8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Clrn3Q8BHH8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clrn3Q8BHH8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Clrn3Q8BHH8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.61■■□□□ 1.05
Clrn3Q8BHH8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clrn3Q8BHH8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clrn3Q8BHH8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clrn3Q8BHH8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Clrn3Q8BHH8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clrn3Q8BHH8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Clrn3Q8BHH8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.6■■□□□ 1.05
Clrn3Q8BHH8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clrn3Q8BHH8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Clrn3Q8BHH8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.6■■□□□ 1.05
Clrn3Q8BHH8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn3Q8BHH8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.59■■□□□ 1.05
Clrn3Q8BHH8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn3Q8BHH8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn3Q8BHH8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn3Q8BHH8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn3Q8BHH8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Clrn3Q8BHH8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Clrn3Q8BHH8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Clrn3Q8BHH8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Clrn3Q8BHH8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clrn3Q8BHH8 Particl-201ENSMUST00000205370 1560 ntBASIC21.57■■□□□ 1.04
Clrn3Q8BHH8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clrn3Q8BHH8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clrn3Q8BHH8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Clrn3Q8BHH8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Clrn3Q8BHH8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Clrn3Q8BHH8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clrn3Q8BHH8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clrn3Q8BHH8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clrn3Q8BHH8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clrn3Q8BHH8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clrn3Q8BHH8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clrn3Q8BHH8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.52■■□□□ 1.04
Clrn3Q8BHH8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.52■■□□□ 1.04
Clrn3Q8BHH8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clrn3Q8BHH8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Clrn3Q8BHH8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.52■■□□□ 1.04
Clrn3Q8BHH8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clrn3Q8BHH8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clrn3Q8BHH8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clrn3Q8BHH8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Clrn3Q8BHH8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Clrn3Q8BHH8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Clrn3Q8BHH8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn3Q8BHH8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn3Q8BHH8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn3Q8BHH8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn3Q8BHH8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.47■■□□□ 1.03
Clrn3Q8BHH8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn3Q8BHH8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Clrn3Q8BHH8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.45■■□□□ 1.02
Clrn3Q8BHH8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
Clrn3Q8BHH8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Clrn3Q8BHH8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Clrn3Q8BHH8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.44■■□□□ 1.02
Clrn3Q8BHH8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Clrn3Q8BHH8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
Clrn3Q8BHH8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Clrn3Q8BHH8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms