Protein–RNA interactions for Protein: Q8BFQ9

Klhl42, Kelch-like protein 42, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klhl42Q8BFQ9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Klhl42Q8BFQ9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Klhl42Q8BFQ9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Klhl42Q8BFQ9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Klhl42Q8BFQ9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Klhl42Q8BFQ9 Gm24970-201ENSMUST00000175582 82 ntBASIC21.23■□□□□ 0.99
Klhl42Q8BFQ9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Klhl42Q8BFQ9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Klhl42Q8BFQ9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.21■□□□□ 0.99
Klhl42Q8BFQ9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.21■□□□□ 0.99
Klhl42Q8BFQ9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Klhl42Q8BFQ9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Klhl42Q8BFQ9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Klhl42Q8BFQ9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Klhl42Q8BFQ9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Klhl42Q8BFQ9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Klhl42Q8BFQ9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Klhl42Q8BFQ9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.2■□□□□ 0.98
Klhl42Q8BFQ9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Klhl42Q8BFQ9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Klhl42Q8BFQ9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Klhl42Q8BFQ9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Klhl42Q8BFQ9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Klhl42Q8BFQ9 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.18■□□□□ 0.98
Klhl42Q8BFQ9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Klhl42Q8BFQ9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Klhl42Q8BFQ9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Klhl42Q8BFQ9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Klhl42Q8BFQ9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Klhl42Q8BFQ9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Klhl42Q8BFQ9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Klhl42Q8BFQ9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Klhl42Q8BFQ9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Klhl42Q8BFQ9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Klhl42Q8BFQ9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Klhl42Q8BFQ9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.15■□□□□ 0.98
Klhl42Q8BFQ9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Klhl42Q8BFQ9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Klhl42Q8BFQ9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Klhl42Q8BFQ9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.13■□□□□ 0.97
Klhl42Q8BFQ9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Klhl42Q8BFQ9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Klhl42Q8BFQ9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Klhl42Q8BFQ9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.12■□□□□ 0.97
Klhl42Q8BFQ9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Klhl42Q8BFQ9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Klhl42Q8BFQ9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Klhl42Q8BFQ9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Klhl42Q8BFQ9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Klhl42Q8BFQ9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Klhl42Q8BFQ9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Klhl42Q8BFQ9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Klhl42Q8BFQ9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Klhl42Q8BFQ9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.09■□□□□ 0.97
Klhl42Q8BFQ9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Klhl42Q8BFQ9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Klhl42Q8BFQ9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Klhl42Q8BFQ9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Klhl42Q8BFQ9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Klhl42Q8BFQ9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.08■□□□□ 0.97
Klhl42Q8BFQ9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Klhl42Q8BFQ9 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.08■□□□□ 0.97
Klhl42Q8BFQ9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Klhl42Q8BFQ9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Klhl42Q8BFQ9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.08■□□□□ 0.96
Klhl42Q8BFQ9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Klhl42Q8BFQ9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Klhl42Q8BFQ9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Klhl42Q8BFQ9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Klhl42Q8BFQ9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Klhl42Q8BFQ9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Klhl42Q8BFQ9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Klhl42Q8BFQ9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Klhl42Q8BFQ9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.05■□□□□ 0.96
Klhl42Q8BFQ9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.05■□□□□ 0.96
Klhl42Q8BFQ9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Klhl42Q8BFQ9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Klhl42Q8BFQ9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Klhl42Q8BFQ9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Klhl42Q8BFQ9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms