Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sh3tc2Q80VA5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Sh3tc2Q80VA5 Gm7332-201ENSMUST00000118351 454 ntBASIC25.45■■□□□ 1.66
Sh3tc2Q80VA5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.45■■□□□ 1.66
Sh3tc2Q80VA5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.45■■□□□ 1.66
Sh3tc2Q80VA5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Sh3tc2Q80VA5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Sh3tc2Q80VA5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sh3tc2Q80VA5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.44■■□□□ 1.66
Sh3tc2Q80VA5 Gm45364-201ENSMUST00000210883 159 ntBASIC25.43■■□□□ 1.66
Sh3tc2Q80VA5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sh3tc2Q80VA5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sh3tc2Q80VA5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3tc2Q80VA5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Sh3tc2Q80VA5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Sh3tc2Q80VA5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sh3tc2Q80VA5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sh3tc2Q80VA5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sh3tc2Q80VA5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sh3tc2Q80VA5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Sh3tc2Q80VA5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sh3tc2Q80VA5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3tc2Q80VA5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3tc2Q80VA5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3tc2Q80VA5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3tc2Q80VA5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3tc2Q80VA5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3tc2Q80VA5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3tc2Q80VA5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.35■■□□□ 1.65
Sh3tc2Q80VA5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3tc2Q80VA5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Sh3tc2Q80VA5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.33■■□□□ 1.65
Sh3tc2Q80VA5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sh3tc2Q80VA5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sh3tc2Q80VA5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.33■■□□□ 1.65
Sh3tc2Q80VA5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.33■■□□□ 1.65
Sh3tc2Q80VA5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sh3tc2Q80VA5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3tc2Q80VA5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3tc2Q80VA5 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.32■■□□□ 1.64
Sh3tc2Q80VA5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3tc2Q80VA5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3tc2Q80VA5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Sh3tc2Q80VA5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.3■■□□□ 1.64
Sh3tc2Q80VA5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3tc2Q80VA5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3tc2Q80VA5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.3■■□□□ 1.64
Sh3tc2Q80VA5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3tc2Q80VA5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.3■■□□□ 1.64
Sh3tc2Q80VA5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3tc2Q80VA5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sh3tc2Q80VA5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3tc2Q80VA5 Gm37136-201ENSMUST00000194368 194 ntBASIC25.27■■□□□ 1.64
Sh3tc2Q80VA5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3tc2Q80VA5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3tc2Q80VA5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.27■■□□□ 1.64
Sh3tc2Q80VA5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3tc2Q80VA5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3tc2Q80VA5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Sh3tc2Q80VA5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3tc2Q80VA5 Gm14523-201ENSMUST00000117260 558 ntBASIC25.23■■□□□ 1.63
Sh3tc2Q80VA5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sh3tc2Q80VA5 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.22■■□□□ 1.63
Sh3tc2Q80VA5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sh3tc2Q80VA5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.22■■□□□ 1.63
Sh3tc2Q80VA5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Sh3tc2Q80VA5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sh3tc2Q80VA5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Sh3tc2Q80VA5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.19■■□□□ 1.62
Sh3tc2Q80VA5 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.19■■□□□ 1.62
Sh3tc2Q80VA5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3tc2Q80VA5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Sh3tc2Q80VA5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3tc2Q80VA5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Sh3tc2Q80VA5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sh3tc2Q80VA5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sh3tc2Q80VA5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Sh3tc2Q80VA5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Sh3tc2Q80VA5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.15■■□□□ 1.62
Sh3tc2Q80VA5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sh3tc2Q80VA5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Sh3tc2Q80VA5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.14■■□□□ 1.62
Sh3tc2Q80VA5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sh3tc2Q80VA5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
Sh3tc2Q80VA5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3tc2Q80VA5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3tc2Q80VA5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3tc2Q80VA5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3tc2Q80VA5 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.12■■□□□ 1.61
Sh3tc2Q80VA5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3tc2Q80VA5 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.12■■□□□ 1.61
Sh3tc2Q80VA5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Sh3tc2Q80VA5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3tc2Q80VA5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3tc2Q80VA5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3tc2Q80VA5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3tc2Q80VA5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3tc2Q80VA5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3tc2Q80VA5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3tc2Q80VA5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms