Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.6■■□□□ 1.69
Ush1gQ80T11 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.6■■□□□ 1.69
Ush1gQ80T11 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.59■■□□□ 1.69
Ush1gQ80T11 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ush1gQ80T11 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
Ush1gQ80T11 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ush1gQ80T11 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.58■■□□□ 1.69
Ush1gQ80T11 Gm4799-201ENSMUST00000095396 657 ntBASIC25.58■■□□□ 1.69
Ush1gQ80T11 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ush1gQ80T11 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Ush1gQ80T11 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.58■■□□□ 1.68
Ush1gQ80T11 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ush1gQ80T11 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.57■■□□□ 1.68
Ush1gQ80T11 Gm12366-201ENSMUST00000121722 873 ntBASIC25.57■■□□□ 1.68
Ush1gQ80T11 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.57■■□□□ 1.68
Ush1gQ80T11 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.57■■□□□ 1.68
Ush1gQ80T11 Gm5786-201ENSMUST00000085368 882 ntBASIC25.57■■□□□ 1.68
Ush1gQ80T11 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ush1gQ80T11 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ush1gQ80T11 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
Ush1gQ80T11 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.56■■□□□ 1.68
Ush1gQ80T11 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.55■■□□□ 1.68
Ush1gQ80T11 Gm16437-201ENSMUST00000025669 507 ntBASIC25.55■■□□□ 1.68
Ush1gQ80T11 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ush1gQ80T11 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ush1gQ80T11 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ush1gQ80T11 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ush1gQ80T11 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ush1gQ80T11 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ush1gQ80T11 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ush1gQ80T11 Mir3960-201ENSMUST00000198213 73 ntBASIC25.51■■□□□ 1.67
Ush1gQ80T11 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ush1gQ80T11 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ush1gQ80T11 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ush1gQ80T11 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.5■■□□□ 1.67
Ush1gQ80T11 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.5■■□□□ 1.67
Ush1gQ80T11 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ush1gQ80T11 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ush1gQ80T11 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ush1gQ80T11 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ush1gQ80T11 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ush1gQ80T11 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ush1gQ80T11 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ush1gQ80T11 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ush1gQ80T11 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.46■■□□□ 1.67
Ush1gQ80T11 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ush1gQ80T11 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ush1gQ80T11 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ush1gQ80T11 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ush1gQ80T11 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.44■■□□□ 1.66
Ush1gQ80T11 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ush1gQ80T11 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Ush1gQ80T11 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.43■■□□□ 1.66
Ush1gQ80T11 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ush1gQ80T11 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ush1gQ80T11 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ush1gQ80T11 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ush1gQ80T11 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ush1gQ80T11 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ush1gQ80T11 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ush1gQ80T11 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ush1gQ80T11 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
Ush1gQ80T11 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ush1gQ80T11 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ush1gQ80T11 Gm45364-201ENSMUST00000210883 159 ntBASIC25.39■■□□□ 1.66
Ush1gQ80T11 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ush1gQ80T11 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ush1gQ80T11 Gm7332-201ENSMUST00000118351 454 ntBASIC25.38■■□□□ 1.65
Ush1gQ80T11 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.37■■□□□ 1.65
Ush1gQ80T11 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ush1gQ80T11 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.37■■□□□ 1.65
Ush1gQ80T11 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ush1gQ80T11 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ush1gQ80T11 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ush1gQ80T11 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.35■■□□□ 1.65
Ush1gQ80T11 Gm37136-201ENSMUST00000194368 194 ntBASIC25.35■■□□□ 1.65
Ush1gQ80T11 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ush1gQ80T11 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.32■■□□□ 1.64
Ush1gQ80T11 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ush1gQ80T11 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.31■■□□□ 1.64
Ush1gQ80T11 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ush1gQ80T11 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ush1gQ80T11 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ush1gQ80T11 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ush1gQ80T11 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.3■■□□□ 1.64
Ush1gQ80T11 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ush1gQ80T11 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ush1gQ80T11 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ush1gQ80T11 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Ush1gQ80T11 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ush1gQ80T11 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ush1gQ80T11 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ush1gQ80T11 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.28■■□□□ 1.64
Ush1gQ80T11 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Ush1gQ80T11 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ush1gQ80T11 Gm27502-201ENSMUST00000183495 199 ntBASIC25.27■■□□□ 1.64
Ush1gQ80T11 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.27■■□□□ 1.64
Ush1gQ80T11 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ush1gQ80T11 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Ush1gQ80T11 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms