Protein–RNA interactions for Protein: Q62219

Tgfb1i1, Transforming growth factor beta-1-induced transcript 1 protein, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1i1Q62219 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Tgfb1i1Q62219 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tgfb1i1Q62219 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tgfb1i1Q62219 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Tgfb1i1Q62219 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Tgfb1i1Q62219 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Tgfb1i1Q62219 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.82■■■□□ 2.2
Tgfb1i1Q62219 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Tgfb1i1Q62219 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tgfb1i1Q62219 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tgfb1i1Q62219 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Tgfb1i1Q62219 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.8■■■□□ 2.2
Tgfb1i1Q62219 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Tgfb1i1Q62219 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Tgfb1i1Q62219 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Tgfb1i1Q62219 Gm4799-201ENSMUST00000095396 657 ntBASIC28.79■■■□□ 2.2
Tgfb1i1Q62219 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tgfb1i1Q62219 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tgfb1i1Q62219 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tgfb1i1Q62219 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.78■■■□□ 2.2
Tgfb1i1Q62219 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Tgfb1i1Q62219 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Tgfb1i1Q62219 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tgfb1i1Q62219 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.76■■■□□ 2.19
Tgfb1i1Q62219 Gm6311-201ENSMUST00000073790 878 ntBASIC28.76■■■□□ 2.19
Tgfb1i1Q62219 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tgfb1i1Q62219 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tgfb1i1Q62219 Gm11175-201ENSMUST00000116172 543 ntBASIC28.75■■■□□ 2.19
Tgfb1i1Q62219 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Tgfb1i1Q62219 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Tgfb1i1Q62219 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tgfb1i1Q62219 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Tgfb1i1Q62219 Gm45364-201ENSMUST00000210883 159 ntBASIC28.72■■■□□ 2.19
Tgfb1i1Q62219 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Tgfb1i1Q62219 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Tgfb1i1Q62219 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.71■■■□□ 2.19
Tgfb1i1Q62219 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Tgfb1i1Q62219 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Tgfb1i1Q62219 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.7■■■□□ 2.18
Tgfb1i1Q62219 Mir3960-201ENSMUST00000198213 73 ntBASIC28.69■■■□□ 2.18
Tgfb1i1Q62219 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.68■■■□□ 2.18
Tgfb1i1Q62219 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
Tgfb1i1Q62219 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.67■■■□□ 2.18
Tgfb1i1Q62219 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.67■■■□□ 2.18
Tgfb1i1Q62219 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Tgfb1i1Q62219 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.65■■■□□ 2.18
Tgfb1i1Q62219 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Tgfb1i1Q62219 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Tgfb1i1Q62219 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Tgfb1i1Q62219 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Tgfb1i1Q62219 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.63■■■□□ 2.17
Tgfb1i1Q62219 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Tgfb1i1Q62219 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Tgfb1i1Q62219 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.62■■■□□ 2.17
Tgfb1i1Q62219 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tgfb1i1Q62219 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Tgfb1i1Q62219 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tgfb1i1Q62219 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tgfb1i1Q62219 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Tgfb1i1Q62219 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Tgfb1i1Q62219 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.59■■■□□ 2.17
Tgfb1i1Q62219 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Tgfb1i1Q62219 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tgfb1i1Q62219 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tgfb1i1Q62219 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Tgfb1i1Q62219 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.58■■■□□ 2.17
Tgfb1i1Q62219 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Tgfb1i1Q62219 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tgfb1i1Q62219 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.57■■■□□ 2.16
Tgfb1i1Q62219 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tgfb1i1Q62219 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.57■■■□□ 2.16
Tgfb1i1Q62219 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Tgfb1i1Q62219 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Tgfb1i1Q62219 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Tgfb1i1Q62219 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.56■■■□□ 2.16
Tgfb1i1Q62219 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Tgfb1i1Q62219 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Tgfb1i1Q62219 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Tgfb1i1Q62219 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Tgfb1i1Q62219 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Tgfb1i1Q62219 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Tgfb1i1Q62219 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tgfb1i1Q62219 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tgfb1i1Q62219 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tgfb1i1Q62219 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tgfb1i1Q62219 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tgfb1i1Q62219 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Tgfb1i1Q62219 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Tgfb1i1Q62219 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tgfb1i1Q62219 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Tgfb1i1Q62219 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Tgfb1i1Q62219 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.52■■■□□ 2.16
Tgfb1i1Q62219 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC28.51■■■□□ 2.16
Tgfb1i1Q62219 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Tgfb1i1Q62219 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Tgfb1i1Q62219 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Tgfb1i1Q62219 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Tgfb1i1Q62219 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tgfb1i1Q62219 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Tgfb1i1Q62219 Gm9812-201ENSMUST00000061934 968 ntBASIC28.5■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms