Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.36■□□□□ 0.85
Traf4Q61382 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.36■□□□□ 0.85
Traf4Q61382 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Traf4Q61382 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Traf4Q61382 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Traf4Q61382 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.36■□□□□ 0.85
Traf4Q61382 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Traf4Q61382 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Traf4Q61382 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Traf4Q61382 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Traf4Q61382 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Traf4Q61382 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Traf4Q61382 Gm30023-201ENSMUST00000197970 889 ntBASIC20.34■□□□□ 0.85
Traf4Q61382 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.34■□□□□ 0.85
Traf4Q61382 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Traf4Q61382 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Traf4Q61382 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Traf4Q61382 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.32■□□□□ 0.84
Traf4Q61382 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Traf4Q61382 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.32■□□□□ 0.84
Traf4Q61382 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Traf4Q61382 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Traf4Q61382 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Traf4Q61382 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.3■□□□□ 0.84
Traf4Q61382 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Traf4Q61382 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Traf4Q61382 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.29■□□□□ 0.84
Traf4Q61382 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.29■□□□□ 0.84
Traf4Q61382 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Traf4Q61382 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Traf4Q61382 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Traf4Q61382 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Traf4Q61382 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Traf4Q61382 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Traf4Q61382 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Traf4Q61382 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.26■□□□□ 0.83
Traf4Q61382 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Traf4Q61382 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Traf4Q61382 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Traf4Q61382 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Traf4Q61382 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Traf4Q61382 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Traf4Q61382 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Traf4Q61382 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Traf4Q61382 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Traf4Q61382 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Traf4Q61382 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Traf4Q61382 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Traf4Q61382 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Traf4Q61382 Particl-201ENSMUST00000205370 1560 ntBASIC20.24■□□□□ 0.83
Traf4Q61382 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Traf4Q61382 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.23■□□□□ 0.83
Traf4Q61382 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Traf4Q61382 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Traf4Q61382 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Traf4Q61382 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Traf4Q61382 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Traf4Q61382 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Traf4Q61382 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.22■□□□□ 0.83
Traf4Q61382 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.21■□□□□ 0.83
Traf4Q61382 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Traf4Q61382 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Traf4Q61382 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Traf4Q61382 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Traf4Q61382 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Traf4Q61382 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Traf4Q61382 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Traf4Q61382 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Traf4Q61382 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Traf4Q61382 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Traf4Q61382 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Traf4Q61382 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.18■□□□□ 0.82
Traf4Q61382 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Traf4Q61382 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Traf4Q61382 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Traf4Q61382 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Traf4Q61382 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Traf4Q61382 Gm11175-201ENSMUST00000116172 543 ntBASIC20.18■□□□□ 0.82
Traf4Q61382 Mir6538-201ENSMUST00000183713 110 ntBASIC20.18■□□□□ 0.82
Traf4Q61382 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Traf4Q61382 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Traf4Q61382 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Traf4Q61382 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Traf4Q61382 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Traf4Q61382 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.16■□□□□ 0.82
Traf4Q61382 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Traf4Q61382 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.16■□□□□ 0.82
Traf4Q61382 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Traf4Q61382 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Traf4Q61382 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Traf4Q61382 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Traf4Q61382 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Traf4Q61382 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Traf4Q61382 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Traf4Q61382 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Traf4Q61382 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Traf4Q61382 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Traf4Q61382 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Traf4Q61382 Gm6311-201ENSMUST00000073790 878 ntBASIC20.14■□□□□ 0.81
Traf4Q61382 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms