Protein–RNA interactions for Protein: Q61329

Zfhx3, Zinc finger homeobox protein 3, mousemouse

Predictions only

Length 3,726 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfhx3Q61329 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zfhx3Q61329 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zfhx3Q61329 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.4■■□□□ 1.02
Zfhx3Q61329 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.39■■□□□ 1.02
Zfhx3Q61329 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zfhx3Q61329 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zfhx3Q61329 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zfhx3Q61329 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zfhx3Q61329 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zfhx3Q61329 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zfhx3Q61329 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zfhx3Q61329 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.38■■□□□ 1.01
Zfhx3Q61329 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zfhx3Q61329 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zfhx3Q61329 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zfhx3Q61329 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zfhx3Q61329 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.36■■□□□ 1.01
Zfhx3Q61329 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.36■■□□□ 1.01
Zfhx3Q61329 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zfhx3Q61329 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zfhx3Q61329 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.36■■□□□ 1.01
Zfhx3Q61329 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.35■■□□□ 1.01
Zfhx3Q61329 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.35■■□□□ 1.01
Zfhx3Q61329 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zfhx3Q61329 Gm10420-201ENSMUST00000121713 882 ntBASIC21.34■■□□□ 1.01
Zfhx3Q61329 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.34■■□□□ 1.01
Zfhx3Q61329 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.34■■□□□ 1.01
Zfhx3Q61329 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfhx3Q61329 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfhx3Q61329 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.34■■□□□ 1.01
Zfhx3Q61329 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Zfhx3Q61329 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zfhx3Q61329 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.32■■□□□ 1
Zfhx3Q61329 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Zfhx3Q61329 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.32■■□□□ 1
Zfhx3Q61329 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.32■■□□□ 1
Zfhx3Q61329 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Zfhx3Q61329 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.31■■□□□ 1
Zfhx3Q61329 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zfhx3Q61329 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zfhx3Q61329 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zfhx3Q61329 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zfhx3Q61329 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
Zfhx3Q61329 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zfhx3Q61329 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.3■■□□□ 1
Zfhx3Q61329 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Zfhx3Q61329 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.29■■□□□ 1
Zfhx3Q61329 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
Zfhx3Q61329 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zfhx3Q61329 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Zfhx3Q61329 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zfhx3Q61329 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zfhx3Q61329 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zfhx3Q61329 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Zfhx3Q61329 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zfhx3Q61329 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Zfhx3Q61329 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Zfhx3Q61329 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zfhx3Q61329 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Zfhx3Q61329 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zfhx3Q61329 Mir3960-201ENSMUST00000198213 73 ntBASIC21.25■□□□□ 0.99
Zfhx3Q61329 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Zfhx3Q61329 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zfhx3Q61329 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zfhx3Q61329 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfhx3Q61329 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zfhx3Q61329 Gm13238-201ENSMUST00000117655 780 ntBASIC21.22■□□□□ 0.99
Zfhx3Q61329 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.22■□□□□ 0.99
Zfhx3Q61329 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Zfhx3Q61329 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.22■□□□□ 0.99
Zfhx3Q61329 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Zfhx3Q61329 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfhx3Q61329 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zfhx3Q61329 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zfhx3Q61329 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Zfhx3Q61329 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.2■□□□□ 0.98
Zfhx3Q61329 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zfhx3Q61329 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zfhx3Q61329 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Zfhx3Q61329 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zfhx3Q61329 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zfhx3Q61329 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.17■□□□□ 0.98
Zfhx3Q61329 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.17■□□□□ 0.98
Zfhx3Q61329 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.17■□□□□ 0.98
Zfhx3Q61329 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.17■□□□□ 0.98
Zfhx3Q61329 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.16■□□□□ 0.98
Zfhx3Q61329 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Zfhx3Q61329 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zfhx3Q61329 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx3Q61329 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.15■□□□□ 0.98
Zfhx3Q61329 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx3Q61329 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.15■□□□□ 0.98
Zfhx3Q61329 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx3Q61329 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx3Q61329 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx3Q61329 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Zfhx3Q61329 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx3Q61329 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx3Q61329 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Zfhx3Q61329 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms