Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col12a1Q60847 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Col12a1Q60847 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col12a1Q60847 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24■■□□□ 1.43
Col12a1Q60847 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col12a1Q60847 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.99■■□□□ 1.43
Col12a1Q60847 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col12a1Q60847 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col12a1Q60847 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.98■■□□□ 1.43
Col12a1Q60847 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col12a1Q60847 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.97■■□□□ 1.43
Col12a1Q60847 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.97■■□□□ 1.43
Col12a1Q60847 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.97■■□□□ 1.43
Col12a1Q60847 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col12a1Q60847 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.96■■□□□ 1.43
Col12a1Q60847 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col12a1Q60847 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col12a1Q60847 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col12a1Q60847 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Col12a1Q60847 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.94■■□□□ 1.42
Col12a1Q60847 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Col12a1Q60847 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col12a1Q60847 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col12a1Q60847 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.93■■□□□ 1.42
Col12a1Q60847 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Col12a1Q60847 Rps24-207ENSMUST00000224568 714 ntBASIC23.93■■□□□ 1.42
Col12a1Q60847 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col12a1Q60847 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.91■■□□□ 1.42
Col12a1Q60847 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Col12a1Q60847 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col12a1Q60847 Gm45102-201ENSMUST00000207427 857 ntBASIC23.91■■□□□ 1.42
Col12a1Q60847 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col12a1Q60847 Gm15820-201ENSMUST00000201566 728 ntBASIC23.9■■□□□ 1.42
Col12a1Q60847 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col12a1Q60847 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col12a1Q60847 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.89■■□□□ 1.42
Col12a1Q60847 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.89■■□□□ 1.42
Col12a1Q60847 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Col12a1Q60847 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Col12a1Q60847 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Col12a1Q60847 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.88■■□□□ 1.41
Col12a1Q60847 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col12a1Q60847 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Col12a1Q60847 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col12a1Q60847 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col12a1Q60847 Gm14117-201ENSMUST00000122417 843 ntBASIC23.86■■□□□ 1.41
Col12a1Q60847 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col12a1Q60847 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col12a1Q60847 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col12a1Q60847 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col12a1Q60847 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col12a1Q60847 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col12a1Q60847 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Col12a1Q60847 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col12a1Q60847 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col12a1Q60847 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.83■■□□□ 1.41
Col12a1Q60847 Serp2-204ENSMUST00000228055 705 ntBASIC23.83■■□□□ 1.4
Col12a1Q60847 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.82■■□□□ 1.4
Col12a1Q60847 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Col12a1Q60847 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.82■■□□□ 1.4
Col12a1Q60847 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col12a1Q60847 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Col12a1Q60847 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.8■■□□□ 1.4
Col12a1Q60847 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col12a1Q60847 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col12a1Q60847 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col12a1Q60847 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Col12a1Q60847 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Col12a1Q60847 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col12a1Q60847 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col12a1Q60847 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col12a1Q60847 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Col12a1Q60847 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col12a1Q60847 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col12a1Q60847 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.76■■□□□ 1.39
Col12a1Q60847 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.75■■□□□ 1.39
Col12a1Q60847 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col12a1Q60847 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col12a1Q60847 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.75■■□□□ 1.39
Col12a1Q60847 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.74■■□□□ 1.39
Col12a1Q60847 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col12a1Q60847 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col12a1Q60847 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col12a1Q60847 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col12a1Q60847 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col12a1Q60847 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.73■■□□□ 1.39
Col12a1Q60847 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Col12a1Q60847 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col12a1Q60847 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col12a1Q60847 Gm13238-201ENSMUST00000117655 780 ntBASIC23.73■■□□□ 1.39
Col12a1Q60847 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col12a1Q60847 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Col12a1Q60847 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col12a1Q60847 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col12a1Q60847 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col12a1Q60847 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col12a1Q60847 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col12a1Q60847 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.71■■□□□ 1.39
Col12a1Q60847 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col12a1Q60847 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms