Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav2Q5R1I9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav2Q5R1I9 Amer2-203ENSMUST00000225247 2662 ntBASIC18.53■□□□□ 0.56
Trav2Q5R1I9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.52■□□□□ 0.56
Trav2Q5R1I9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav2Q5R1I9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.52■□□□□ 0.56
Trav2Q5R1I9 Mir3960-201ENSMUST00000198213 73 ntBASIC18.52■□□□□ 0.56
Trav2Q5R1I9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav2Q5R1I9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav2Q5R1I9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav2Q5R1I9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav2Q5R1I9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav2Q5R1I9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav2Q5R1I9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav2Q5R1I9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav2Q5R1I9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.48■□□□□ 0.55
Trav2Q5R1I9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav2Q5R1I9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav2Q5R1I9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav2Q5R1I9 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.48■□□□□ 0.55
Trav2Q5R1I9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav2Q5R1I9 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.47■□□□□ 0.55
Trav2Q5R1I9 Gm11175-201ENSMUST00000116172 543 ntBASIC18.47■□□□□ 0.55
Trav2Q5R1I9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav2Q5R1I9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trav2Q5R1I9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav2Q5R1I9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav2Q5R1I9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav2Q5R1I9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav2Q5R1I9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.46■□□□□ 0.55
Trav2Q5R1I9 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.46■□□□□ 0.54
Trav2Q5R1I9 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.46■□□□□ 0.54
Trav2Q5R1I9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.45■□□□□ 0.54
Trav2Q5R1I9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav2Q5R1I9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav2Q5R1I9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav2Q5R1I9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav2Q5R1I9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav2Q5R1I9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav2Q5R1I9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav2Q5R1I9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav2Q5R1I9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav2Q5R1I9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav2Q5R1I9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav2Q5R1I9 Scarna2-201ENSMUST00000157560 414 ntBASIC18.41■□□□□ 0.54
Trav2Q5R1I9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav2Q5R1I9 Gm45364-201ENSMUST00000210883 159 ntBASIC18.41■□□□□ 0.54
Trav2Q5R1I9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav2Q5R1I9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.41■□□□□ 0.54
Trav2Q5R1I9 Gm11687-201ENSMUST00000118911 886 ntBASIC18.4■□□□□ 0.54
Trav2Q5R1I9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav2Q5R1I9 Gm9806-201ENSMUST00000051080 552 ntBASIC18.4■□□□□ 0.54
Trav2Q5R1I9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav2Q5R1I9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav2Q5R1I9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.39■□□□□ 0.53
Trav2Q5R1I9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav2Q5R1I9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav2Q5R1I9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav2Q5R1I9 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.39■□□□□ 0.53
Trav2Q5R1I9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav2Q5R1I9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav2Q5R1I9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav2Q5R1I9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav2Q5R1I9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav2Q5R1I9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav2Q5R1I9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trav2Q5R1I9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
Trav2Q5R1I9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav2Q5R1I9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav2Q5R1I9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav2Q5R1I9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav2Q5R1I9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav2Q5R1I9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav2Q5R1I9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav2Q5R1I9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav2Q5R1I9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav2Q5R1I9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav2Q5R1I9 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.33■□□□□ 0.53
Trav2Q5R1I9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav2Q5R1I9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav2Q5R1I9 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.33■□□□□ 0.52
Trav2Q5R1I9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav2Q5R1I9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.32■□□□□ 0.52
Trav2Q5R1I9 Gm16437-201ENSMUST00000025669 507 ntBASIC18.32■□□□□ 0.52
Trav2Q5R1I9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav2Q5R1I9 Gm9812-201ENSMUST00000061934 968 ntBASIC18.31■□□□□ 0.52
Trav2Q5R1I9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav2Q5R1I9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav2Q5R1I9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.3■□□□□ 0.52
Trav2Q5R1I9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.3■□□□□ 0.52
Trav2Q5R1I9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.3■□□□□ 0.52
Trav2Q5R1I9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav2Q5R1I9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav2Q5R1I9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav2Q5R1I9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav2Q5R1I9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav2Q5R1I9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav2Q5R1I9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav2Q5R1I9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav2Q5R1I9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms