Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.59■□□□□ 0.73
Trav6d-4Q5R1I0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trav6d-4Q5R1I0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.59■□□□□ 0.73
Trav6d-4Q5R1I0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6d-4Q5R1I0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.58■□□□□ 0.72
Trav6d-4Q5R1I0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6d-4Q5R1I0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6d-4Q5R1I0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trav6d-4Q5R1I0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6d-4Q5R1I0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.56■□□□□ 0.72
Trav6d-4Q5R1I0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trav6d-4Q5R1I0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Mir3960-201ENSMUST00000198213 73 ntBASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6d-4Q5R1I0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6d-4Q5R1I0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.54■□□□□ 0.72
Trav6d-4Q5R1I0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6d-4Q5R1I0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6d-4Q5R1I0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6d-4Q5R1I0 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.54■□□□□ 0.72
Trav6d-4Q5R1I0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trav6d-4Q5R1I0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6d-4Q5R1I0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.53■□□□□ 0.72
Trav6d-4Q5R1I0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6d-4Q5R1I0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6d-4Q5R1I0 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.53■□□□□ 0.72
Trav6d-4Q5R1I0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav6d-4Q5R1I0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6d-4Q5R1I0 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.52■□□□□ 0.72
Trav6d-4Q5R1I0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6d-4Q5R1I0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trav6d-4Q5R1I0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6d-4Q5R1I0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6d-4Q5R1I0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6d-4Q5R1I0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6d-4Q5R1I0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6d-4Q5R1I0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6d-4Q5R1I0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trav6d-4Q5R1I0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6d-4Q5R1I0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6d-4Q5R1I0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6d-4Q5R1I0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6d-4Q5R1I0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6d-4Q5R1I0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6d-4Q5R1I0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6d-4Q5R1I0 Gm45364-201ENSMUST00000210883 159 ntBASIC19.48■□□□□ 0.71
Trav6d-4Q5R1I0 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.48■□□□□ 0.71
Trav6d-4Q5R1I0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trav6d-4Q5R1I0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6d-4Q5R1I0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6d-4Q5R1I0 Gm11175-201ENSMUST00000116172 543 ntBASIC19.47■□□□□ 0.71
Trav6d-4Q5R1I0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6d-4Q5R1I0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6d-4Q5R1I0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.46■□□□□ 0.71
Trav6d-4Q5R1I0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trav6d-4Q5R1I0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6d-4Q5R1I0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6d-4Q5R1I0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav6d-4Q5R1I0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav6d-4Q5R1I0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-4Q5R1I0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-4Q5R1I0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-4Q5R1I0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-4Q5R1I0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-4Q5R1I0 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.44■□□□□ 0.7
Trav6d-4Q5R1I0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-4Q5R1I0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6d-4Q5R1I0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6d-4Q5R1I0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
Trav6d-4Q5R1I0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6d-4Q5R1I0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Trav6d-4Q5R1I0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6d-4Q5R1I0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Trav6d-4Q5R1I0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6d-4Q5R1I0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6d-4Q5R1I0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav6d-4Q5R1I0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6d-4Q5R1I0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6d-4Q5R1I0 Scarna2-201ENSMUST00000157560 414 ntBASIC19.41■□□□□ 0.7
Trav6d-4Q5R1I0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6d-4Q5R1I0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6d-4Q5R1I0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6d-4Q5R1I0 Mir6538-201ENSMUST00000183713 110 ntBASIC19.4■□□□□ 0.7
Trav6d-4Q5R1I0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6d-4Q5R1I0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6d-4Q5R1I0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav6d-4Q5R1I0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6d-4Q5R1I0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6d-4Q5R1I0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6d-4Q5R1I0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6d-4Q5R1I0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6d-4Q5R1I0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.38■□□□□ 0.69
Trav6d-4Q5R1I0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.38■□□□□ 0.69
Trav6d-4Q5R1I0 Gm9812-201ENSMUST00000061934 968 ntBASIC19.38■□□□□ 0.69
Trav6d-4Q5R1I0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms