Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm12253Q5NC48 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gm12253Q5NC48 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm12253Q5NC48 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm12253Q5NC48 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.12■□□□□ 0.81
Gm12253Q5NC48 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm12253Q5NC48 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Gm12253Q5NC48 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12253Q5NC48 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gm12253Q5NC48 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.11■□□□□ 0.81
Gm12253Q5NC48 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12253Q5NC48 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12253Q5NC48 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12253Q5NC48 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.1■□□□□ 0.81
Gm12253Q5NC48 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.1■□□□□ 0.81
Gm12253Q5NC48 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12253Q5NC48 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12253Q5NC48 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm12253Q5NC48 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm12253Q5NC48 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gm12253Q5NC48 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm12253Q5NC48 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm12253Q5NC48 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm12253Q5NC48 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm12253Q5NC48 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm12253Q5NC48 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Gm12253Q5NC48 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Gm12253Q5NC48 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm12253Q5NC48 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm12253Q5NC48 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm12253Q5NC48 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm12253Q5NC48 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm12253Q5NC48 Cap2-205ENSMUST00000225824 1634 ntBASIC20.05■□□□□ 0.8
Gm12253Q5NC48 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm12253Q5NC48 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gm12253Q5NC48 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm12253Q5NC48 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm12253Q5NC48 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm12253Q5NC48 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm12253Q5NC48 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Gm12253Q5NC48 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm12253Q5NC48 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm12253Q5NC48 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Gm12253Q5NC48 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm12253Q5NC48 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm12253Q5NC48 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12253Q5NC48 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12253Q5NC48 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12253Q5NC48 Gm4799-201ENSMUST00000095396 657 ntBASIC20■□□□□ 0.79
Gm12253Q5NC48 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12253Q5NC48 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Gm12253Q5NC48 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12253Q5NC48 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20■□□□□ 0.79
Gm12253Q5NC48 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm12253Q5NC48 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm12253Q5NC48 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm12253Q5NC48 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm12253Q5NC48 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm12253Q5NC48 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm12253Q5NC48 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
Gm12253Q5NC48 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Gm12253Q5NC48 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm12253Q5NC48 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12253Q5NC48 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12253Q5NC48 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.96■□□□□ 0.79
Gm12253Q5NC48 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12253Q5NC48 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12253Q5NC48 Gm37136-201ENSMUST00000194368 194 ntBASIC19.95■□□□□ 0.78
Gm12253Q5NC48 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm12253Q5NC48 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm12253Q5NC48 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.95■□□□□ 0.78
Gm12253Q5NC48 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm12253Q5NC48 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm12253Q5NC48 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.95■□□□□ 0.78
Gm12253Q5NC48 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm12253Q5NC48 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm12253Q5NC48 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm12253Q5NC48 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm12253Q5NC48 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm12253Q5NC48 Scarna2-201ENSMUST00000157560 414 ntBASIC19.93■□□□□ 0.78
Gm12253Q5NC48 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm12253Q5NC48 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.93■□□□□ 0.78
Gm12253Q5NC48 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm12253Q5NC48 Mir3960-201ENSMUST00000198213 73 ntBASIC19.92■□□□□ 0.78
Gm12253Q5NC48 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm12253Q5NC48 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm12253Q5NC48 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Gm12253Q5NC48 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm12253Q5NC48 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.91■□□□□ 0.78
Gm12253Q5NC48 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.91■□□□□ 0.78
Gm12253Q5NC48 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm12253Q5NC48 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm12253Q5NC48 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.9■□□□□ 0.78
Gm12253Q5NC48 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm12253Q5NC48 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm12253Q5NC48 Gm9806-201ENSMUST00000051080 552 ntBASIC19.89■□□□□ 0.77
Gm12253Q5NC48 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Gm12253Q5NC48 Gm11687-201ENSMUST00000118911 886 ntBASIC19.88■□□□□ 0.77
Gm12253Q5NC48 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm12253Q5NC48 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms