Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.71■■■□□ 2.03
Rnf20Q5DTM8 Gm8503-201ENSMUST00000118131 455 ntBASIC27.7■■■□□ 2.02
Rnf20Q5DTM8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Rnf20Q5DTM8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
Rnf20Q5DTM8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Rnf20Q5DTM8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rnf20Q5DTM8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Rnf20Q5DTM8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rnf20Q5DTM8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rnf20Q5DTM8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rnf20Q5DTM8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rnf20Q5DTM8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rnf20Q5DTM8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Rnf20Q5DTM8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rnf20Q5DTM8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.64■■■□□ 2.02
Rnf20Q5DTM8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rnf20Q5DTM8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rnf20Q5DTM8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rnf20Q5DTM8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Rnf20Q5DTM8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rnf20Q5DTM8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.61■■■□□ 2.01
Rnf20Q5DTM8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rnf20Q5DTM8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rnf20Q5DTM8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rnf20Q5DTM8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rnf20Q5DTM8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rnf20Q5DTM8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.6■■■□□ 2.01
Rnf20Q5DTM8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rnf20Q5DTM8 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.58■■■□□ 2.01
Rnf20Q5DTM8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rnf20Q5DTM8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
Rnf20Q5DTM8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rnf20Q5DTM8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Rnf20Q5DTM8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rnf20Q5DTM8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rnf20Q5DTM8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rnf20Q5DTM8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.56■■■□□ 2
Rnf20Q5DTM8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rnf20Q5DTM8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
Rnf20Q5DTM8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rnf20Q5DTM8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.55■■■□□ 2
Rnf20Q5DTM8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.55■■■□□ 2
Rnf20Q5DTM8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.55■■■□□ 2
Rnf20Q5DTM8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rnf20Q5DTM8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rnf20Q5DTM8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rnf20Q5DTM8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC27.54■■■□□ 2
Rnf20Q5DTM8 Gm37136-201ENSMUST00000194368 194 ntBASIC27.54■■■□□ 2
Rnf20Q5DTM8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Rnf20Q5DTM8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
Rnf20Q5DTM8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.53■■■□□ 2
Rnf20Q5DTM8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rnf20Q5DTM8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rnf20Q5DTM8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rnf20Q5DTM8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rnf20Q5DTM8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rnf20Q5DTM8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rnf20Q5DTM8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Rnf20Q5DTM8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rnf20Q5DTM8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rnf20Q5DTM8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rnf20Q5DTM8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Rnf20Q5DTM8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rnf20Q5DTM8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rnf20Q5DTM8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rnf20Q5DTM8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rnf20Q5DTM8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rnf20Q5DTM8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.47■■□□□ 1.99
Rnf20Q5DTM8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rnf20Q5DTM8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.46■■□□□ 1.99
Rnf20Q5DTM8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rnf20Q5DTM8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Rnf20Q5DTM8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Rnf20Q5DTM8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rnf20Q5DTM8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rnf20Q5DTM8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rnf20Q5DTM8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.42■■□□□ 1.98
Rnf20Q5DTM8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.42■■□□□ 1.98
Rnf20Q5DTM8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Rnf20Q5DTM8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Rnf20Q5DTM8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.4■■□□□ 1.98
Rnf20Q5DTM8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Rnf20Q5DTM8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.4■■□□□ 1.98
Rnf20Q5DTM8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.4■■□□□ 1.98
Rnf20Q5DTM8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rnf20Q5DTM8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rnf20Q5DTM8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Rnf20Q5DTM8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Rnf20Q5DTM8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Rnf20Q5DTM8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rnf20Q5DTM8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rnf20Q5DTM8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rnf20Q5DTM8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.38■■□□□ 1.97
Rnf20Q5DTM8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Rnf20Q5DTM8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rnf20Q5DTM8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Rnf20Q5DTM8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rnf20Q5DTM8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rnf20Q5DTM8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rnf20Q5DTM8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms