Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
R3hdm4Q4VBF2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
R3hdm4Q4VBF2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
R3hdm4Q4VBF2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
R3hdm4Q4VBF2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
R3hdm4Q4VBF2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
R3hdm4Q4VBF2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
R3hdm4Q4VBF2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.27■■□□□ 1.64
R3hdm4Q4VBF2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
R3hdm4Q4VBF2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
R3hdm4Q4VBF2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
R3hdm4Q4VBF2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
R3hdm4Q4VBF2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
R3hdm4Q4VBF2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
R3hdm4Q4VBF2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.24■■□□□ 1.63
R3hdm4Q4VBF2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
R3hdm4Q4VBF2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
R3hdm4Q4VBF2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
R3hdm4Q4VBF2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
R3hdm4Q4VBF2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
R3hdm4Q4VBF2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.2■■□□□ 1.62
R3hdm4Q4VBF2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
R3hdm4Q4VBF2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
R3hdm4Q4VBF2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
R3hdm4Q4VBF2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
R3hdm4Q4VBF2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
R3hdm4Q4VBF2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.12■■□□□ 1.61
R3hdm4Q4VBF2 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.11■■□□□ 1.61
R3hdm4Q4VBF2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
R3hdm4Q4VBF2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
R3hdm4Q4VBF2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
R3hdm4Q4VBF2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
R3hdm4Q4VBF2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
R3hdm4Q4VBF2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
R3hdm4Q4VBF2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
R3hdm4Q4VBF2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Gm4799-201ENSMUST00000095396 657 ntBASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
R3hdm4Q4VBF2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.02■■□□□ 1.6
R3hdm4Q4VBF2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
R3hdm4Q4VBF2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
R3hdm4Q4VBF2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
R3hdm4Q4VBF2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
R3hdm4Q4VBF2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
R3hdm4Q4VBF2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25■■□□□ 1.59
R3hdm4Q4VBF2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
R3hdm4Q4VBF2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms