Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm4799-201ENSMUST00000095396 657 ntBASIC23.75■■□□□ 1.39
Naf1Q3UMQ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Naf1Q3UMQ8 Gm45364-201ENSMUST00000210883 159 ntBASIC23.73■■□□□ 1.39
Naf1Q3UMQ8 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.73■■□□□ 1.39
Naf1Q3UMQ8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.73■■□□□ 1.39
Naf1Q3UMQ8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.73■■□□□ 1.39
Naf1Q3UMQ8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Naf1Q3UMQ8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Naf1Q3UMQ8 Mir3960-201ENSMUST00000198213 73 ntBASIC23.72■■□□□ 1.39
Naf1Q3UMQ8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Naf1Q3UMQ8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Naf1Q3UMQ8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Naf1Q3UMQ8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Naf1Q3UMQ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Naf1Q3UMQ8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Naf1Q3UMQ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Naf1Q3UMQ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Naf1Q3UMQ8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Naf1Q3UMQ8 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.67■■□□□ 1.38
Naf1Q3UMQ8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.67■■□□□ 1.38
Naf1Q3UMQ8 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.67■■□□□ 1.38
Naf1Q3UMQ8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Naf1Q3UMQ8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Naf1Q3UMQ8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.65■■□□□ 1.38
Naf1Q3UMQ8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Naf1Q3UMQ8 Scarna2-201ENSMUST00000157560 414 ntBASIC23.65■■□□□ 1.38
Naf1Q3UMQ8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Naf1Q3UMQ8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Naf1Q3UMQ8 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.65■■□□□ 1.38
Naf1Q3UMQ8 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.64■■□□□ 1.38
Naf1Q3UMQ8 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.64■■□□□ 1.38
Naf1Q3UMQ8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.64■■□□□ 1.37
Naf1Q3UMQ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Naf1Q3UMQ8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Naf1Q3UMQ8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Naf1Q3UMQ8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Naf1Q3UMQ8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Naf1Q3UMQ8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Naf1Q3UMQ8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Naf1Q3UMQ8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Naf1Q3UMQ8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Naf1Q3UMQ8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.61■■□□□ 1.37
Naf1Q3UMQ8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.59■■□□□ 1.37
Naf1Q3UMQ8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Naf1Q3UMQ8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.59■■□□□ 1.37
Naf1Q3UMQ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.58■■□□□ 1.37
Naf1Q3UMQ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.58■■□□□ 1.37
Naf1Q3UMQ8 Gm9806-201ENSMUST00000051080 552 ntBASIC23.58■■□□□ 1.37
Naf1Q3UMQ8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Naf1Q3UMQ8 Cap2-205ENSMUST00000225824 1634 ntBASIC23.58■■□□□ 1.36
Naf1Q3UMQ8 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.58■■□□□ 1.36
Naf1Q3UMQ8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Naf1Q3UMQ8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Naf1Q3UMQ8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Naf1Q3UMQ8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Naf1Q3UMQ8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Naf1Q3UMQ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.55■■□□□ 1.36
Naf1Q3UMQ8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Naf1Q3UMQ8 Gm16437-201ENSMUST00000025669 507 ntBASIC23.55■■□□□ 1.36
Naf1Q3UMQ8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Naf1Q3UMQ8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Naf1Q3UMQ8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Naf1Q3UMQ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Naf1Q3UMQ8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.54■■□□□ 1.36
Naf1Q3UMQ8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Naf1Q3UMQ8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Naf1Q3UMQ8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Naf1Q3UMQ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Naf1Q3UMQ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Naf1Q3UMQ8 Gm11687-201ENSMUST00000118911 886 ntBASIC23.52■■□□□ 1.36
Naf1Q3UMQ8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Naf1Q3UMQ8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Naf1Q3UMQ8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Naf1Q3UMQ8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.51■■□□□ 1.35
Naf1Q3UMQ8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Naf1Q3UMQ8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.51■■□□□ 1.35
Naf1Q3UMQ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
Naf1Q3UMQ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Naf1Q3UMQ8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Naf1Q3UMQ8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Naf1Q3UMQ8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Naf1Q3UMQ8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Naf1Q3UMQ8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Naf1Q3UMQ8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.49■■□□□ 1.35
Naf1Q3UMQ8 Gm9812-201ENSMUST00000061934 968 ntBASIC23.49■■□□□ 1.35
Naf1Q3UMQ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Naf1Q3UMQ8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.49■■□□□ 1.35
Naf1Q3UMQ8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Naf1Q3UMQ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.48■■□□□ 1.35
Naf1Q3UMQ8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Naf1Q3UMQ8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Naf1Q3UMQ8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Naf1Q3UMQ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Naf1Q3UMQ8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.47■■□□□ 1.35
Naf1Q3UMQ8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Naf1Q3UMQ8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Naf1Q3UMQ8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Naf1Q3UMQ8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.46■■□□□ 1.35
Naf1Q3UMQ8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Naf1Q3UMQ8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms