Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tnrc6aQ3UHK8 Mir3960-201ENSMUST00000198213 73 ntBASIC22.04■■□□□ 1.12
Tnrc6aQ3UHK8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.04■■□□□ 1.12
Tnrc6aQ3UHK8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tnrc6aQ3UHK8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tnrc6aQ3UHK8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tnrc6aQ3UHK8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tnrc6aQ3UHK8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tnrc6aQ3UHK8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tnrc6aQ3UHK8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tnrc6aQ3UHK8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Tnrc6aQ3UHK8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Tnrc6aQ3UHK8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tnrc6aQ3UHK8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tnrc6aQ3UHK8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tnrc6aQ3UHK8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tnrc6aQ3UHK8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnrc6aQ3UHK8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tnrc6aQ3UHK8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnrc6aQ3UHK8 Gm16437-201ENSMUST00000025669 507 ntBASIC21.96■■□□□ 1.11
Tnrc6aQ3UHK8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnrc6aQ3UHK8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnrc6aQ3UHK8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnrc6aQ3UHK8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnrc6aQ3UHK8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnrc6aQ3UHK8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnrc6aQ3UHK8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnrc6aQ3UHK8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.94■■□□□ 1.1
Tnrc6aQ3UHK8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnrc6aQ3UHK8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Tnrc6aQ3UHK8 Gm27502-201ENSMUST00000183495 199 ntBASIC21.93■■□□□ 1.1
Tnrc6aQ3UHK8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.93■■□□□ 1.1
Tnrc6aQ3UHK8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Tnrc6aQ3UHK8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tnrc6aQ3UHK8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tnrc6aQ3UHK8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tnrc6aQ3UHK8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tnrc6aQ3UHK8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tnrc6aQ3UHK8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.91■■□□□ 1.1
Tnrc6aQ3UHK8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.91■■□□□ 1.1
Tnrc6aQ3UHK8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tnrc6aQ3UHK8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnrc6aQ3UHK8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnrc6aQ3UHK8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tnrc6aQ3UHK8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnrc6aQ3UHK8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Tnrc6aQ3UHK8 Gm7332-201ENSMUST00000118351 454 ntBASIC21.9■■□□□ 1.1
Tnrc6aQ3UHK8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnrc6aQ3UHK8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tnrc6aQ3UHK8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnrc6aQ3UHK8 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.89■■□□□ 1.09
Tnrc6aQ3UHK8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.88■■□□□ 1.09
Tnrc6aQ3UHK8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Tnrc6aQ3UHK8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tnrc6aQ3UHK8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tnrc6aQ3UHK8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.88■■□□□ 1.09
Tnrc6aQ3UHK8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnrc6aQ3UHK8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnrc6aQ3UHK8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tnrc6aQ3UHK8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tnrc6aQ3UHK8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc6aQ3UHK8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc6aQ3UHK8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Tnrc6aQ3UHK8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.85■■□□□ 1.09
Tnrc6aQ3UHK8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.85■■□□□ 1.09
Tnrc6aQ3UHK8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Tnrc6aQ3UHK8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnrc6aQ3UHK8 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.85■■□□□ 1.09
Tnrc6aQ3UHK8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Tnrc6aQ3UHK8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Tnrc6aQ3UHK8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnrc6aQ3UHK8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.83■■□□□ 1.09
Tnrc6aQ3UHK8 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.83■■□□□ 1.09
Tnrc6aQ3UHK8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tnrc6aQ3UHK8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnrc6aQ3UHK8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnrc6aQ3UHK8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnrc6aQ3UHK8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnrc6aQ3UHK8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnrc6aQ3UHK8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnrc6aQ3UHK8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tnrc6aQ3UHK8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnrc6aQ3UHK8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnrc6aQ3UHK8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.77■■□□□ 1.08
Tnrc6aQ3UHK8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnrc6aQ3UHK8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc6aQ3UHK8 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.76■■□□□ 1.07
Tnrc6aQ3UHK8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc6aQ3UHK8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc6aQ3UHK8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc6aQ3UHK8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.76■■□□□ 1.07
Tnrc6aQ3UHK8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnrc6aQ3UHK8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.75■■□□□ 1.07
Tnrc6aQ3UHK8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.75■■□□□ 1.07
Tnrc6aQ3UHK8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Tnrc6aQ3UHK8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnrc6aQ3UHK8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc6aQ3UHK8 Gm14523-201ENSMUST00000117260 558 ntBASIC21.73■■□□□ 1.07
Tnrc6aQ3UHK8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tnrc6aQ3UHK8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms