Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Gm11175-201ENSMUST00000116172 543 ntBASIC21.86■■□□□ 1.09
Lrrk1Q3UHC2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrk1Q3UHC2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrk1Q3UHC2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.84■■□□□ 1.09
Lrrk1Q3UHC2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrk1Q3UHC2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Lrrk1Q3UHC2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.84■■□□□ 1.09
Lrrk1Q3UHC2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lrrk1Q3UHC2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lrrk1Q3UHC2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.82■■□□□ 1.08
Lrrk1Q3UHC2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrk1Q3UHC2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Lrrk1Q3UHC2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Lrrk1Q3UHC2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Lrrk1Q3UHC2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.81■■□□□ 1.08
Lrrk1Q3UHC2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lrrk1Q3UHC2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Lrrk1Q3UHC2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Lrrk1Q3UHC2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrk1Q3UHC2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lrrk1Q3UHC2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lrrk1Q3UHC2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lrrk1Q3UHC2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lrrk1Q3UHC2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lrrk1Q3UHC2 Gm45364-201ENSMUST00000210883 159 ntBASIC21.77■■□□□ 1.07
Lrrk1Q3UHC2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Lrrk1Q3UHC2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.76■■□□□ 1.07
Lrrk1Q3UHC2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lrrk1Q3UHC2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lrrk1Q3UHC2 Cap2-205ENSMUST00000225824 1634 ntBASIC21.75■■□□□ 1.07
Lrrk1Q3UHC2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lrrk1Q3UHC2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.74■■□□□ 1.07
Lrrk1Q3UHC2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.74■■□□□ 1.07
Lrrk1Q3UHC2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lrrk1Q3UHC2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lrrk1Q3UHC2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Lrrk1Q3UHC2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lrrk1Q3UHC2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.73■■□□□ 1.07
Lrrk1Q3UHC2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lrrk1Q3UHC2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lrrk1Q3UHC2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lrrk1Q3UHC2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lrrk1Q3UHC2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lrrk1Q3UHC2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lrrk1Q3UHC2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Lrrk1Q3UHC2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lrrk1Q3UHC2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Lrrk1Q3UHC2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Lrrk1Q3UHC2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lrrk1Q3UHC2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lrrk1Q3UHC2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Lrrk1Q3UHC2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.7■■□□□ 1.06
Lrrk1Q3UHC2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lrrk1Q3UHC2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lrrk1Q3UHC2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lrrk1Q3UHC2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lrrk1Q3UHC2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lrrk1Q3UHC2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lrrk1Q3UHC2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lrrk1Q3UHC2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lrrk1Q3UHC2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.67■■□□□ 1.06
Lrrk1Q3UHC2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lrrk1Q3UHC2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lrrk1Q3UHC2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Lrrk1Q3UHC2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.65■■□□□ 1.06
Lrrk1Q3UHC2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lrrk1Q3UHC2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.65■■□□□ 1.06
Lrrk1Q3UHC2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lrrk1Q3UHC2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Lrrk1Q3UHC2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Lrrk1Q3UHC2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lrrk1Q3UHC2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lrrk1Q3UHC2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lrrk1Q3UHC2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lrrk1Q3UHC2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Lrrk1Q3UHC2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Lrrk1Q3UHC2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.63■■□□□ 1.05
Lrrk1Q3UHC2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Lrrk1Q3UHC2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.62■■□□□ 1.05
Lrrk1Q3UHC2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lrrk1Q3UHC2 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.62■■□□□ 1.05
Lrrk1Q3UHC2 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.62■■□□□ 1.05
Lrrk1Q3UHC2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.62■■□□□ 1.05
Lrrk1Q3UHC2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lrrk1Q3UHC2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lrrk1Q3UHC2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lrrk1Q3UHC2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lrrk1Q3UHC2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lrrk1Q3UHC2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lrrk1Q3UHC2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lrrk1Q3UHC2 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.59■■□□□ 1.05
Lrrk1Q3UHC2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lrrk1Q3UHC2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.59■■□□□ 1.05
Lrrk1Q3UHC2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lrrk1Q3UHC2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lrrk1Q3UHC2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lrrk1Q3UHC2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrk1Q3UHC2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrk1Q3UHC2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lrrk1Q3UHC2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms