Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Col5a2Q3U962 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Col5a2Q3U962 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Col5a2Q3U962 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Col5a2Q3U962 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Col5a2Q3U962 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Col5a2Q3U962 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Col5a2Q3U962 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Col5a2Q3U962 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.17
Col5a2Q3U962 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Col5a2Q3U962 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.63■■■□□ 2.17
Col5a2Q3U962 Gm10420-201ENSMUST00000121713 882 ntBASIC28.62■■■□□ 2.17
Col5a2Q3U962 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Col5a2Q3U962 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.62■■■□□ 2.17
Col5a2Q3U962 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.62■■■□□ 2.17
Col5a2Q3U962 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Col5a2Q3U962 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col5a2Q3U962 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col5a2Q3U962 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col5a2Q3U962 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.6■■■□□ 2.17
Col5a2Q3U962 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col5a2Q3U962 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.6■■■□□ 2.17
Col5a2Q3U962 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col5a2Q3U962 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.6■■■□□ 2.17
Col5a2Q3U962 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Col5a2Q3U962 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.59■■■□□ 2.17
Col5a2Q3U962 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Col5a2Q3U962 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.58■■■□□ 2.17
Col5a2Q3U962 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.58■■■□□ 2.17
Col5a2Q3U962 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Col5a2Q3U962 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Col5a2Q3U962 Gm9812-201ENSMUST00000061934 968 ntBASIC28.57■■■□□ 2.16
Col5a2Q3U962 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.57■■■□□ 2.16
Col5a2Q3U962 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.56■■■□□ 2.16
Col5a2Q3U962 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Col5a2Q3U962 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.55■■■□□ 2.16
Col5a2Q3U962 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.55■■■□□ 2.16
Col5a2Q3U962 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Col5a2Q3U962 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.54■■■□□ 2.16
Col5a2Q3U962 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Col5a2Q3U962 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Col5a2Q3U962 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Col5a2Q3U962 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Col5a2Q3U962 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col5a2Q3U962 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col5a2Q3U962 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Col5a2Q3U962 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Col5a2Q3U962 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Col5a2Q3U962 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col5a2Q3U962 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.5■■■□□ 2.15
Col5a2Q3U962 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Col5a2Q3U962 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col5a2Q3U962 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Col5a2Q3U962 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Col5a2Q3U962 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Col5a2Q3U962 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Col5a2Q3U962 Gm15546-201ENSMUST00000122095 826 ntBASIC28.45■■■□□ 2.14
Col5a2Q3U962 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Col5a2Q3U962 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Col5a2Q3U962 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.44■■■□□ 2.14
Col5a2Q3U962 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Col5a2Q3U962 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Col5a2Q3U962 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Col5a2Q3U962 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.43■■■□□ 2.14
Col5a2Q3U962 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC28.43■■■□□ 2.14
Col5a2Q3U962 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Col5a2Q3U962 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Col5a2Q3U962 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col5a2Q3U962 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.42■■■□□ 2.14
Col5a2Q3U962 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col5a2Q3U962 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Col5a2Q3U962 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Col5a2Q3U962 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Col5a2Q3U962 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Col5a2Q3U962 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28.41■■■□□ 2.14
Col5a2Q3U962 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Col5a2Q3U962 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Col5a2Q3U962 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col5a2Q3U962 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Col5a2Q3U962 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Col5a2Q3U962 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Col5a2Q3U962 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Col5a2Q3U962 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
Col5a2Q3U962 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Col5a2Q3U962 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.38■■■□□ 2.13
Col5a2Q3U962 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Col5a2Q3U962 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Col5a2Q3U962 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Col5a2Q3U962 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC28.37■■■□□ 2.13
Col5a2Q3U962 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Col5a2Q3U962 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Col5a2Q3U962 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Col5a2Q3U962 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Col5a2Q3U962 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Col5a2Q3U962 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Col5a2Q3U962 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Col5a2Q3U962 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Col5a2Q3U962 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Col5a2Q3U962 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Col5a2Q3U962 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms