Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC34.7■■■■□ 3.15
Trpm1Q2TV84 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Trpm1Q2TV84 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Trpm1Q2TV84 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Trpm1Q2TV84 Gm9910-201ENSMUST00000195385 1550 ntBASIC34.69■■■■□ 3.14
Trpm1Q2TV84 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Trpm1Q2TV84 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC34.68■■■■□ 3.14
Trpm1Q2TV84 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC34.68■■■■□ 3.14
Trpm1Q2TV84 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC34.68■■■■□ 3.14
Trpm1Q2TV84 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Trpm1Q2TV84 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Trpm1Q2TV84 Gm10420-201ENSMUST00000121713 882 ntBASIC34.66■■■■□ 3.14
Trpm1Q2TV84 Gm5921-201ENSMUST00000075898 882 ntBASIC34.66■■■■□ 3.14
Trpm1Q2TV84 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC34.65■■■■□ 3.14
Trpm1Q2TV84 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Trpm1Q2TV84 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Trpm1Q2TV84 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC34.64■■■■□ 3.14
Trpm1Q2TV84 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC34.64■■■■□ 3.14
Trpm1Q2TV84 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Trpm1Q2TV84 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Trpm1Q2TV84 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Trpm1Q2TV84 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Trpm1Q2TV84 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Trpm1Q2TV84 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Trpm1Q2TV84 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
Trpm1Q2TV84 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC34.6■■■■□ 3.13
Trpm1Q2TV84 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Trpm1Q2TV84 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC34.59■■■■□ 3.13
Trpm1Q2TV84 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Trpm1Q2TV84 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Trpm1Q2TV84 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC34.59■■■■□ 3.13
Trpm1Q2TV84 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Trpm1Q2TV84 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Trpm1Q2TV84 Gm5067-201ENSMUST00000170449 1009 ntBASIC34.58■■■■□ 3.13
Trpm1Q2TV84 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC34.55■■■■□ 3.12
Trpm1Q2TV84 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC34.55■■■■□ 3.12
Trpm1Q2TV84 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Trpm1Q2TV84 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
Trpm1Q2TV84 Gm15039-201ENSMUST00000118914 875 ntBASIC34.55■■■■□ 3.12
Trpm1Q2TV84 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Trpm1Q2TV84 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
Trpm1Q2TV84 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC34.54■■■■□ 3.12
Trpm1Q2TV84 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Trpm1Q2TV84 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Trpm1Q2TV84 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
Trpm1Q2TV84 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Trpm1Q2TV84 Gm9812-201ENSMUST00000061934 968 ntBASIC34.52■■■■□ 3.12
Trpm1Q2TV84 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC34.52■■■■□ 3.12
Trpm1Q2TV84 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Trpm1Q2TV84 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
Trpm1Q2TV84 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Trpm1Q2TV84 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC34.48■■■■□ 3.11
Trpm1Q2TV84 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Trpm1Q2TV84 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Trpm1Q2TV84 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Trpm1Q2TV84 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
Trpm1Q2TV84 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Trpm1Q2TV84 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Trpm1Q2TV84 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC34.43■■■■□ 3.1
Trpm1Q2TV84 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Trpm1Q2TV84 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Trpm1Q2TV84 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC34.42■■■■□ 3.1
Trpm1Q2TV84 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Trpm1Q2TV84 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Trpm1Q2TV84 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
Trpm1Q2TV84 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC34.4■■■■□ 3.1
Trpm1Q2TV84 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC34.4■■■■□ 3.1
Trpm1Q2TV84 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC34.39■■■■□ 3.1
Trpm1Q2TV84 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Trpm1Q2TV84 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Trpm1Q2TV84 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC34.38■■■■□ 3.09
Trpm1Q2TV84 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Trpm1Q2TV84 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Trpm1Q2TV84 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Trpm1Q2TV84 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Trpm1Q2TV84 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
Trpm1Q2TV84 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Trpm1Q2TV84 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC34.34■■■■□ 3.09
Trpm1Q2TV84 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Trpm1Q2TV84 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
Trpm1Q2TV84 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC34.33■■■■□ 3.09
Trpm1Q2TV84 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Trpm1Q2TV84 Gm5522-201ENSMUST00000189483 1242 ntBASIC34.33■■■■□ 3.09
Trpm1Q2TV84 AC153911.1-201ENSMUST00000220378 758 ntBASIC34.32■■■■□ 3.08
Trpm1Q2TV84 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC34.31■■■■□ 3.08
Trpm1Q2TV84 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC34.3■■■■□ 3.08
Trpm1Q2TV84 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Trpm1Q2TV84 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Trpm1Q2TV84 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Trpm1Q2TV84 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
Trpm1Q2TV84 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
Trpm1Q2TV84 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Trpm1Q2TV84 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC34.27■■■■□ 3.08
Trpm1Q2TV84 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC34.26■■■■□ 3.08
Trpm1Q2TV84 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Trpm1Q2TV84 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC34.26■■■■□ 3.07
Trpm1Q2TV84 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Trpm1Q2TV84 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
Trpm1Q2TV84 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Trpm1Q2TV84 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms