Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Six5P70178 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six5P70178 Gm7432-201ENSMUST00000210343 879 ntBASIC21.71■■□□□ 1.07
Six5P70178 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six5P70178 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.7■■□□□ 1.06
Six5P70178 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six5P70178 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six5P70178 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six5P70178 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six5P70178 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six5P70178 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six5P70178 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six5P70178 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six5P70178 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six5P70178 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Six5P70178 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
Six5P70178 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six5P70178 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six5P70178 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six5P70178 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six5P70178 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.66■■□□□ 1.06
Six5P70178 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six5P70178 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.65■■□□□ 1.06
Six5P70178 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six5P70178 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Six5P70178 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Six5P70178 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six5P70178 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.63■■□□□ 1.05
Six5P70178 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Six5P70178 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Six5P70178 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Six5P70178 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Six5P70178 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Six5P70178 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six5P70178 Gm11599-201ENSMUST00000118720 878 ntBASIC21.6■■□□□ 1.05
Six5P70178 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six5P70178 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Six5P70178 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six5P70178 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six5P70178 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Six5P70178 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Six5P70178 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Six5P70178 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Six5P70178 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Six5P70178 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.56■■□□□ 1.04
Six5P70178 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Six5P70178 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.55■■□□□ 1.04
Six5P70178 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six5P70178 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.55■■□□□ 1.04
Six5P70178 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Six5P70178 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Six5P70178 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Six5P70178 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Six5P70178 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Six5P70178 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Six5P70178 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Six5P70178 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six5P70178 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Six5P70178 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six5P70178 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Six5P70178 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Six5P70178 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Six5P70178 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six5P70178 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six5P70178 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six5P70178 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six5P70178 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Six5P70178 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six5P70178 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six5P70178 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
Six5P70178 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.5■■□□□ 1.03
Six5P70178 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six5P70178 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Six5P70178 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Six5P70178 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Six5P70178 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Six5P70178 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Six5P70178 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Six5P70178 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
Six5P70178 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Six5P70178 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Six5P70178 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six5P70178 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six5P70178 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Six5P70178 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six5P70178 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Six5P70178 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six5P70178 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six5P70178 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Six5P70178 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Six5P70178 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Six5P70178 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Six5P70178 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms