Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpl27P61358 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl27P61358 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl27P61358 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rpl27P61358 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.76■□□□□ 0.91
Rpl27P61358 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl27P61358 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl27P61358 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl27P61358 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rpl27P61358 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.74■□□□□ 0.91
Rpl27P61358 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.74■□□□□ 0.91
Rpl27P61358 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Rpl27P61358 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl27P61358 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl27P61358 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.72■□□□□ 0.91
Rpl27P61358 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rpl27P61358 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl27P61358 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl27P61358 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl27P61358 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl27P61358 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl27P61358 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl27P61358 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl27P61358 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rpl27P61358 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl27P61358 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl27P61358 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl27P61358 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rpl27P61358 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl27P61358 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl27P61358 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl27P61358 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpl27P61358 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpl27P61358 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpl27P61358 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpl27P61358 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.67■□□□□ 0.9
Rpl27P61358 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.67■□□□□ 0.9
Rpl27P61358 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rpl27P61358 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.66■□□□□ 0.9
Rpl27P61358 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpl27P61358 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.66■□□□□ 0.9
Rpl27P61358 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpl27P61358 Gm6821-201ENSMUST00000107540 542 ntBASIC20.65■□□□□ 0.9
Rpl27P61358 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpl27P61358 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpl27P61358 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Rpl27P61358 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.64■□□□□ 0.89
Rpl27P61358 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.64■□□□□ 0.89
Rpl27P61358 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.64■□□□□ 0.89
Rpl27P61358 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl27P61358 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl27P61358 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rpl27P61358 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl27P61358 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl27P61358 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl27P61358 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.62■□□□□ 0.89
Rpl27P61358 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl27P61358 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl27P61358 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl27P61358 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl27P61358 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl27P61358 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl27P61358 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl27P61358 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl27P61358 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl27P61358 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl27P61358 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl27P61358 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl27P61358 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rpl27P61358 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl27P61358 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl27P61358 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl27P61358 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl27P61358 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl27P61358 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl27P61358 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl27P61358 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl27P61358 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl27P61358 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl27P61358 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpl27P61358 Gm37136-201ENSMUST00000194368 194 ntBASIC20.54■□□□□ 0.88
Rpl27P61358 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpl27P61358 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpl27P61358 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpl27P61358 Gm8503-201ENSMUST00000118131 455 ntBASIC20.53■□□□□ 0.88
Rpl27P61358 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpl27P61358 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl27P61358 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpl27P61358 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpl27P61358 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpl27P61358 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpl27P61358 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.51■□□□□ 0.87
Rpl27P61358 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rpl27P61358 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rpl27P61358 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpl27P61358 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.5■□□□□ 0.87
Rpl27P61358 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpl27P61358 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpl27P61358 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpl27P61358 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms