Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Msh6P54276 Gm4799-201ENSMUST00000095396 657 ntBASIC30,32■■■□□ 2,44
Msh6P54276 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Msh6P54276 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30,31■■■□□ 2,44
Msh6P54276 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30,31■■■□□ 2,44
Msh6P54276 AC154454.1-201ENSMUST00000225253 216 ntBASIC30,31■■■□□ 2,44
Msh6P54276 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Msh6P54276 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30,29■■■□□ 2,44
Msh6P54276 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30,29■■■□□ 2,44
Msh6P54276 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Msh6P54276 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Msh6P54276 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30,28■■■□□ 2,44
Msh6P54276 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30,28■■■□□ 2,44
Msh6P54276 Pkd1-207ENSMUST00000228550 1050 ntBASIC30,28■■■□□ 2,44
Msh6P54276 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Msh6P54276 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30,27■■■□□ 2,44
Msh6P54276 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,43
Msh6P54276 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Msh6P54276 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Msh6P54276 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Msh6P54276 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30,23■■■□□ 2,43
Msh6P54276 Gm16437-201ENSMUST00000025669 507 ntBASIC30,23■■■□□ 2,43
Msh6P54276 Gm45364-201ENSMUST00000210883 159 ntBASIC30,22■■■□□ 2,43
Msh6P54276 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30,21■■■□□ 2,43
Msh6P54276 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30,21■■■□□ 2,43
Msh6P54276 Mir3960-201ENSMUST00000198213 73 ntBASIC30,19■■■□□ 2,42
Msh6P54276 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30,19■■■□□ 2,42
Msh6P54276 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30,19■■■□□ 2,42
Msh6P54276 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Msh6P54276 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30,17■■■□□ 2,42
Msh6P54276 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30,17■■■□□ 2,42
Msh6P54276 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30,15■■■□□ 2,42
Msh6P54276 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30,15■■■□□ 2,42
Msh6P54276 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,41
Msh6P54276 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Msh6P54276 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Msh6P54276 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Msh6P54276 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30,12■■■□□ 2,41
Msh6P54276 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30,11■■■□□ 2,41
Msh6P54276 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Msh6P54276 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Msh6P54276 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Msh6P54276 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30,1■■■□□ 2,41
Msh6P54276 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Msh6P54276 Gm37136-201ENSMUST00000194368 194 ntBASIC30,1■■■□□ 2,41
Msh6P54276 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Msh6P54276 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30,09■■■□□ 2,41
Msh6P54276 Gm27502-201ENSMUST00000183495 199 ntBASIC30,08■■■□□ 2,41
Msh6P54276 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Msh6P54276 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30,07■■■□□ 2,4
Msh6P54276 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30,07■■■□□ 2,4
Msh6P54276 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC30,07■■■□□ 2,4
Msh6P54276 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30,07■■■□□ 2,4
Msh6P54276 Gm7332-201ENSMUST00000118351 454 ntBASIC30,05■■■□□ 2,4
Msh6P54276 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30,05■■■□□ 2,4
Msh6P54276 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Msh6P54276 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30,05■■■□□ 2,4
Msh6P54276 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Msh6P54276 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Msh6P54276 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30,02■■■□□ 2,4
Msh6P54276 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30,02■■■□□ 2,4
Msh6P54276 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,02■■■□□ 2,4
Msh6P54276 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Msh6P54276 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Msh6P54276 Gm13889-201ENSMUST00000099689 1386 ntBASIC30,01■■■□□ 2,39
Msh6P54276 Fezf2-202ENSMUST00000224023 1917 ntBASIC29,99■■■□□ 2,39
Msh6P54276 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Msh6P54276 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC29,99■■■□□ 2,39
Msh6P54276 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29,99■■■□□ 2,39
Msh6P54276 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Msh6P54276 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Msh6P54276 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29,97■■■□□ 2,39
Msh6P54276 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29,97■■■□□ 2,39
Msh6P54276 Gm12818-201ENSMUST00000117562 1349 ntBASIC29,96■■■□□ 2,39
Msh6P54276 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29,96■■■□□ 2,39
Msh6P54276 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Msh6P54276 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Msh6P54276 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29,96■■■□□ 2,39
Msh6P54276 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29,95■■■□□ 2,39
Msh6P54276 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,39
Msh6P54276 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,39
Msh6P54276 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Msh6P54276 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29,94■■■□□ 2,38
Msh6P54276 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC29,93■■■□□ 2,38
Msh6P54276 Gm14523-201ENSMUST00000117260 558 ntBASIC29,92■■■□□ 2,38
Msh6P54276 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29,92■■■□□ 2,38
Msh6P54276 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Msh6P54276 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Msh6P54276 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC29,91■■■□□ 2,38
Msh6P54276 Gm14121-201ENSMUST00000121441 1380 ntBASIC29,91■■■□□ 2,38
Msh6P54276 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC29,9■■■□□ 2,38
Msh6P54276 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29,89■■■□□ 2,37
Msh6P54276 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,37
Msh6P54276 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,37
Msh6P54276 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29,88■■■□□ 2,37
Msh6P54276 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29,87■■■□□ 2,37
Msh6P54276 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Msh6P54276 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
Msh6P54276 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Msh6P54276 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms