Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm4799-201ENSMUST00000095396 657 ntBASIC21.98■■□□□ 1.11
RoraP51448 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RoraP51448 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RoraP51448 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.97■■□□□ 1.11
RoraP51448 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RoraP51448 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.97■■□□□ 1.11
RoraP51448 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.97■■□□□ 1.11
RoraP51448 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RoraP51448 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RoraP51448 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.95■■□□□ 1.11
RoraP51448 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RoraP51448 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RoraP51448 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RoraP51448 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RoraP51448 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RoraP51448 Mir3960-201ENSMUST00000198213 73 ntBASIC21.93■■□□□ 1.1
RoraP51448 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RoraP51448 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RoraP51448 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RoraP51448 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.92■■□□□ 1.1
RoraP51448 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RoraP51448 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RoraP51448 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RoraP51448 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RoraP51448 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RoraP51448 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RoraP51448 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RoraP51448 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RoraP51448 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RoraP51448 Gm45364-201ENSMUST00000210883 159 ntBASIC21.9■■□□□ 1.1
RoraP51448 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.9■■□□□ 1.1
RoraP51448 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.89■■□□□ 1.1
RoraP51448 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RoraP51448 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RoraP51448 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.88■■□□□ 1.09
RoraP51448 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RoraP51448 Cap2-205ENSMUST00000225824 1634 ntBASIC21.88■■□□□ 1.09
RoraP51448 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.87■■□□□ 1.09
RoraP51448 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RoraP51448 Scarna2-201ENSMUST00000157560 414 ntBASIC21.87■■□□□ 1.09
RoraP51448 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RoraP51448 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RoraP51448 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
RoraP51448 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RoraP51448 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RoraP51448 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.85■■□□□ 1.09
RoraP51448 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RoraP51448 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RoraP51448 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RoraP51448 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RoraP51448 Gm9806-201ENSMUST00000051080 552 ntBASIC21.84■■□□□ 1.09
RoraP51448 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RoraP51448 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RoraP51448 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RoraP51448 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RoraP51448 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RoraP51448 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RoraP51448 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.81■■□□□ 1.08
RoraP51448 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RoraP51448 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.8■■□□□ 1.08
RoraP51448 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RoraP51448 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RoraP51448 Gm11687-201ENSMUST00000118911 886 ntBASIC21.8■■□□□ 1.08
RoraP51448 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RoraP51448 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.8■■□□□ 1.08
RoraP51448 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RoraP51448 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RoraP51448 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RoraP51448 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RoraP51448 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RoraP51448 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.78■■□□□ 1.08
RoraP51448 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RoraP51448 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.77■■□□□ 1.08
RoraP51448 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RoraP51448 Gm16437-201ENSMUST00000025669 507 ntBASIC21.77■■□□□ 1.08
RoraP51448 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RoraP51448 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RoraP51448 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.76■■□□□ 1.07
RoraP51448 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RoraP51448 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RoraP51448 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.75■■□□□ 1.07
RoraP51448 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RoraP51448 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RoraP51448 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.74■■□□□ 1.07
RoraP51448 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.74■■□□□ 1.07
RoraP51448 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RoraP51448 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.74■■□□□ 1.07
RoraP51448 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.73■■□□□ 1.07
RoraP51448 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RoraP51448 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.72■■□□□ 1.07
RoraP51448 Gm9812-201ENSMUST00000061934 968 ntBASIC21.72■■□□□ 1.07
RoraP51448 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RoraP51448 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RoraP51448 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RoraP51448 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RoraP51448 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RoraP51448 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.7■■□□□ 1.06
RoraP51448 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RoraP51448 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RoraP51448 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms