Protein–RNA interactions for Protein: P50571

Gabrb1, Gamma-aminobutyric acid receptor subunit beta-1, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrb1P50571 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gabrb1P50571 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gabrb1P50571 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gabrb1P50571 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gabrb1P50571 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gabrb1P50571 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gabrb1P50571 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gabrb1P50571 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gabrb1P50571 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gabrb1P50571 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gabrb1P50571 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gabrb1P50571 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gabrb1P50571 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.61■□□□□ 0.89
Gabrb1P50571 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.61■□□□□ 0.89
Gabrb1P50571 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gabrb1P50571 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gabrb1P50571 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gabrb1P50571 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gabrb1P50571 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gabrb1P50571 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gabrb1P50571 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.59■□□□□ 0.89
Gabrb1P50571 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gabrb1P50571 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.59■□□□□ 0.89
Gabrb1P50571 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.59■□□□□ 0.89
Gabrb1P50571 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gabrb1P50571 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gabrb1P50571 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Gabrb1P50571 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gabrb1P50571 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gabrb1P50571 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gabrb1P50571 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gabrb1P50571 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gabrb1P50571 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gabrb1P50571 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gabrb1P50571 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gabrb1P50571 Particl-201ENSMUST00000205370 1560 ntBASIC20.56■□□□□ 0.88
Gabrb1P50571 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gabrb1P50571 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gabrb1P50571 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Gabrb1P50571 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gabrb1P50571 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gabrb1P50571 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gabrb1P50571 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gabrb1P50571 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gabrb1P50571 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gabrb1P50571 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gabrb1P50571 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gabrb1P50571 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gabrb1P50571 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gabrb1P50571 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gabrb1P50571 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.54■□□□□ 0.88
Gabrb1P50571 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gabrb1P50571 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Gabrb1P50571 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gabrb1P50571 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.53■□□□□ 0.88
Gabrb1P50571 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gabrb1P50571 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Gabrb1P50571 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gabrb1P50571 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Gabrb1P50571 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gabrb1P50571 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gabrb1P50571 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gabrb1P50571 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gabrb1P50571 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Gabrb1P50571 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gabrb1P50571 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.5■□□□□ 0.87
Gabrb1P50571 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Gabrb1P50571 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gabrb1P50571 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gabrb1P50571 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gabrb1P50571 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gabrb1P50571 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gabrb1P50571 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gabrb1P50571 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gabrb1P50571 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gabrb1P50571 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gabrb1P50571 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gabrb1P50571 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gabrb1P50571 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gabrb1P50571 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Gabrb1P50571 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gabrb1P50571 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gabrb1P50571 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gabrb1P50571 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gabrb1P50571 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.47■□□□□ 0.87
Gabrb1P50571 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Gabrb1P50571 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.46■□□□□ 0.87
Gabrb1P50571 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gabrb1P50571 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gabrb1P50571 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gabrb1P50571 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gabrb1P50571 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.45■□□□□ 0.86
Gabrb1P50571 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gabrb1P50571 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gabrb1P50571 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gabrb1P50571 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gabrb1P50571 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gabrb1P50571 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gabrb1P50571 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gabrb1P50571 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms