Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf1P15314 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Irf1P15314 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.19■□□□□ 0.98
Irf1P15314 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf1P15314 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Irf1P15314 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf1P15314 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Irf1P15314 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf1P15314 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf1P15314 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
Irf1P15314 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.17■□□□□ 0.98
Irf1P15314 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf1P15314 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Irf1P15314 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf1P15314 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.16■□□□□ 0.98
Irf1P15314 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Irf1P15314 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Irf1P15314 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Irf1P15314 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Irf1P15314 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf1P15314 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Irf1P15314 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf1P15314 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Irf1P15314 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.14■□□□□ 0.97
Irf1P15314 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Irf1P15314 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Irf1P15314 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Irf1P15314 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Irf1P15314 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Irf1P15314 Gm6311-201ENSMUST00000073790 878 ntBASIC21.13■□□□□ 0.97
Irf1P15314 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Irf1P15314 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Irf1P15314 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Irf1P15314 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Irf1P15314 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf1P15314 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Irf1P15314 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Irf1P15314 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf1P15314 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Irf1P15314 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.1■□□□□ 0.97
Irf1P15314 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf1P15314 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Irf1P15314 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.09■□□□□ 0.97
Irf1P15314 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf1P15314 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Irf1P15314 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Irf1P15314 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Irf1P15314 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Irf1P15314 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.07■□□□□ 0.96
Irf1P15314 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Irf1P15314 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf1P15314 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf1P15314 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Irf1P15314 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf1P15314 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Irf1P15314 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf1P15314 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf1P15314 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Irf1P15314 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Irf1P15314 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Irf1P15314 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf1P15314 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf1P15314 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf1P15314 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf1P15314 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf1P15314 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf1P15314 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Irf1P15314 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.03■□□□□ 0.96
Irf1P15314 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.03■□□□□ 0.96
Irf1P15314 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf1P15314 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf1P15314 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf1P15314 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Irf1P15314 Gm4799-201ENSMUST00000095396 657 ntBASIC21.02■□□□□ 0.96
Irf1P15314 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.02■□□□□ 0.96
Irf1P15314 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Irf1P15314 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Irf1P15314 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Irf1P15314 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf1P15314 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf1P15314 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21■□□□□ 0.95
Irf1P15314 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Irf1P15314 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.99■□□□□ 0.95
Irf1P15314 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Irf1P15314 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.99■□□□□ 0.95
Irf1P15314 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf1P15314 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Irf1P15314 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.97■□□□□ 0.95
Irf1P15314 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf1P15314 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf1P15314 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf1P15314 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf1P15314 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.95■□□□□ 0.94
Irf1P15314 Gm37136-201ENSMUST00000194368 194 ntBASIC20.95■□□□□ 0.94
Irf1P15314 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf1P15314 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf1P15314 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf1P15314 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Irf1P15314 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Irf1P15314 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms