Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxb2P0C1T1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxb2P0C1T1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxb2P0C1T1 Gm4799-201ENSMUST00000095396 657 ntBASIC20.28■□□□□ 0.84
Hoxb2P0C1T1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.28■□□□□ 0.84
Hoxb2P0C1T1 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.28■□□□□ 0.84
Hoxb2P0C1T1 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.28■□□□□ 0.84
Hoxb2P0C1T1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Hoxb2P0C1T1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxb2P0C1T1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxb2P0C1T1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 Gm45364-201ENSMUST00000210883 159 ntBASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxb2P0C1T1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.25■□□□□ 0.83
Hoxb2P0C1T1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.25■□□□□ 0.83
Hoxb2P0C1T1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxb2P0C1T1 Mir3960-201ENSMUST00000198213 73 ntBASIC20.25■□□□□ 0.83
Hoxb2P0C1T1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.25■□□□□ 0.83
Hoxb2P0C1T1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hoxb2P0C1T1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxb2P0C1T1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxb2P0C1T1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxb2P0C1T1 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.23■□□□□ 0.83
Hoxb2P0C1T1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxb2P0C1T1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxb2P0C1T1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxb2P0C1T1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hoxb2P0C1T1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxb2P0C1T1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxb2P0C1T1 Mir6538-201ENSMUST00000183713 110 ntBASIC20.21■□□□□ 0.83
Hoxb2P0C1T1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxb2P0C1T1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxb2P0C1T1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxb2P0C1T1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.2■□□□□ 0.82
Hoxb2P0C1T1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxb2P0C1T1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxb2P0C1T1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxb2P0C1T1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxb2P0C1T1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxb2P0C1T1 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.18■□□□□ 0.82
Hoxb2P0C1T1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxb2P0C1T1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxb2P0C1T1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxb2P0C1T1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxb2P0C1T1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxb2P0C1T1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxb2P0C1T1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxb2P0C1T1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
Hoxb2P0C1T1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxb2P0C1T1 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.16■□□□□ 0.82
Hoxb2P0C1T1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.15■□□□□ 0.82
Hoxb2P0C1T1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxb2P0C1T1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxb2P0C1T1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxb2P0C1T1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.14■□□□□ 0.81
Hoxb2P0C1T1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxb2P0C1T1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxb2P0C1T1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxb2P0C1T1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxb2P0C1T1 Scarna2-201ENSMUST00000157560 414 ntBASIC20.13■□□□□ 0.81
Hoxb2P0C1T1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Hoxb2P0C1T1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxb2P0C1T1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.12■□□□□ 0.81
Hoxb2P0C1T1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxb2P0C1T1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.11■□□□□ 0.81
Hoxb2P0C1T1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxb2P0C1T1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Hoxb2P0C1T1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxb2P0C1T1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxb2P0C1T1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxb2P0C1T1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.1■□□□□ 0.81
Hoxb2P0C1T1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxb2P0C1T1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxb2P0C1T1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.09■□□□□ 0.81
Hoxb2P0C1T1 Gm9806-201ENSMUST00000051080 552 ntBASIC20.09■□□□□ 0.81
Hoxb2P0C1T1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxb2P0C1T1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxb2P0C1T1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxb2P0C1T1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxb2P0C1T1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Hoxb2P0C1T1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxb2P0C1T1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxb2P0C1T1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxb2P0C1T1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb2P0C1T1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.07■□□□□ 0.8
Hoxb2P0C1T1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb2P0C1T1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms