Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P06344 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
P06344 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
P06344 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P06344 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
P06344 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.77■□□□□ 0.92
P06344 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
P06344 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P06344 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.76■□□□□ 0.91
P06344 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P06344 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
P06344 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P06344 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P06344 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
P06344 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P06344 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P06344 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P06344 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
P06344 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P06344 Gm37136-201ENSMUST00000194368 194 ntBASIC20.72■□□□□ 0.91
P06344 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P06344 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
P06344 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P06344 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.72■□□□□ 0.91
P06344 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.71■□□□□ 0.91
P06344 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P06344 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
P06344 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P06344 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.7■□□□□ 0.9
P06344 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P06344 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P06344 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
P06344 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
P06344 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P06344 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
P06344 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
P06344 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.67■□□□□ 0.9
P06344 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P06344 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
P06344 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P06344 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
P06344 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P06344 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
P06344 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P06344 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P06344 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.65■□□□□ 0.9
P06344 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
P06344 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
P06344 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
P06344 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P06344 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
P06344 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P06344 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.64■□□□□ 0.89
P06344 Gm6311-201ENSMUST00000073790 878 ntBASIC20.64■□□□□ 0.89
P06344 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
P06344 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
P06344 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
P06344 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.62■□□□□ 0.89
P06344 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.62■□□□□ 0.89
P06344 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
P06344 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P06344 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
P06344 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P06344 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.6■□□□□ 0.89
P06344 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
P06344 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.6■□□□□ 0.89
P06344 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.6■□□□□ 0.89
P06344 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P06344 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P06344 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P06344 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P06344 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P06344 Gm4799-201ENSMUST00000095396 657 ntBASIC20.59■□□□□ 0.89
P06344 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.58■□□□□ 0.89
P06344 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.57■□□□□ 0.88
P06344 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
P06344 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
P06344 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
P06344 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
P06344 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
P06344 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
P06344 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P06344 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.55■□□□□ 0.88
P06344 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
P06344 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.55■□□□□ 0.88
P06344 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P06344 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P06344 Gm11175-201ENSMUST00000116172 543 ntBASIC20.53■□□□□ 0.88
P06344 Mir3960-201ENSMUST00000198213 73 ntBASIC20.53■□□□□ 0.88
P06344 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.53■□□□□ 0.88
P06344 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P06344 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
P06344 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.52■□□□□ 0.88
P06344 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P06344 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P06344 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P06344 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
P06344 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P06344 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P06344 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms