Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P04224 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04224 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04224 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04224 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04224 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04224 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04224 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04224 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P04224 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04224 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.19■□□□□ 0.82
P04224 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04224 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04224 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.17■□□□□ 0.82
P04224 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04224 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
P04224 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P04224 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
P04224 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04224 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P04224 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P04224 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04224 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P04224 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.16■□□□□ 0.82
P04224 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04224 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04224 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04224 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.15■□□□□ 0.82
P04224 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P04224 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.15■□□□□ 0.82
P04224 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04224 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P04224 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
P04224 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04224 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
P04224 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P04224 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04224 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
P04224 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04224 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04224 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P04224 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04224 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
P04224 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04224 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04224 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P04224 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04224 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04224 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04224 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04224 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.09■□□□□ 0.81
P04224 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
P04224 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04224 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04224 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04224 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.08■□□□□ 0.81
P04224 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
P04224 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P04224 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P04224 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P04224 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.08■□□□□ 0.8
P04224 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
P04224 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.07■□□□□ 0.8
P04224 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
P04224 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
P04224 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04224 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04224 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04224 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04224 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04224 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04224 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04224 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04224 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.03■□□□□ 0.8
P04224 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04224 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04224 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04224 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04224 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P04224 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04224 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
P04224 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
P04224 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.01■□□□□ 0.79
P04224 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04224 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04224 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04224 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04224 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P04224 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20■□□□□ 0.79
P04224 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P04224 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P04224 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P04224 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
P04224 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04224 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04224 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
P04224 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04224 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
P04224 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04224 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms