Protein–RNA interactions for Protein: P01796

Ig heavy chain V-III region A4, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01796 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01796 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P01796 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01796 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01796 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.19■□□□□ 0.66
P01796 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.19■□□□□ 0.66
P01796 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01796 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01796 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01796 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01796 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01796 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01796 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01796 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01796 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
P01796 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.16■□□□□ 0.66
P01796 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.16■□□□□ 0.66
P01796 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P01796 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01796 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01796 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
P01796 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P01796 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
P01796 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.13■□□□□ 0.65
P01796 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01796 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01796 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01796 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01796 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
P01796 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01796 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01796 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01796 Particl-201ENSMUST00000205370 1560 ntBASIC19.11■□□□□ 0.65
P01796 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01796 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01796 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.11■□□□□ 0.65
P01796 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
P01796 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.1■□□□□ 0.65
P01796 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01796 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
P01796 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P01796 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.09■□□□□ 0.65
P01796 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
P01796 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01796 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01796 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P01796 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
P01796 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
P01796 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.07■□□□□ 0.64
P01796 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01796 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01796 Mir6538-201ENSMUST00000183713 110 ntBASIC19.06■□□□□ 0.64
P01796 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01796 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01796 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01796 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.05■□□□□ 0.64
P01796 Gm30023-201ENSMUST00000197970 889 ntBASIC19.05■□□□□ 0.64
P01796 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01796 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P01796 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P01796 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01796 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01796 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P01796 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01796 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01796 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01796 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01796 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
P01796 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
P01796 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P01796 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
P01796 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
P01796 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01796 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
P01796 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
P01796 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
P01796 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01796 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01796 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01796 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01796 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.98■□□□□ 0.63
P01796 Gm6311-201ENSMUST00000073790 878 ntBASIC18.98■□□□□ 0.63
P01796 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01796 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01796 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01796 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01796 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01796 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01796 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.96■□□□□ 0.63
P01796 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01796 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01796 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01796 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01796 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.95■□□□□ 0.62
P01796 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
P01796 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01796 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01796 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P01796 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01796 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms