Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10226O88253 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10226O88253 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.1■□□□□ 0.49
Gm10226O88253 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Gm10226O88253 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10226O88253 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.09■□□□□ 0.49
Gm10226O88253 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Gm10226O88253 Mir3960-201ENSMUST00000198213 73 ntBASIC18.09■□□□□ 0.49
Gm10226O88253 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.09■□□□□ 0.49
Gm10226O88253 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gm10226O88253 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10226O88253 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10226O88253 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10226O88253 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10226O88253 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm10226O88253 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.07■□□□□ 0.48
Gm10226O88253 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm10226O88253 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm10226O88253 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm10226O88253 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10226O88253 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10226O88253 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10226O88253 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10226O88253 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10226O88253 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10226O88253 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10226O88253 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.05■□□□□ 0.48
Gm10226O88253 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10226O88253 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10226O88253 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10226O88253 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Gm10226O88253 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.04■□□□□ 0.48
Gm10226O88253 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10226O88253 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Gm10226O88253 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10226O88253 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10226O88253 Gm45364-201ENSMUST00000210883 159 ntBASIC18.03■□□□□ 0.48
Gm10226O88253 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10226O88253 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10226O88253 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.02■□□□□ 0.48
Gm10226O88253 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm10226O88253 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.02■□□□□ 0.47
Gm10226O88253 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10226O88253 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10226O88253 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10226O88253 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Gm10226O88253 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm10226O88253 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm10226O88253 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.99■□□□□ 0.47
Gm10226O88253 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10226O88253 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10226O88253 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10226O88253 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10226O88253 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10226O88253 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm10226O88253 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm10226O88253 Gm11175-201ENSMUST00000116172 543 ntBASIC17.97■□□□□ 0.47
Gm10226O88253 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm10226O88253 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm10226O88253 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10226O88253 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10226O88253 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Gm10226O88253 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
Gm10226O88253 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10226O88253 Gm9812-201ENSMUST00000061934 968 ntBASIC17.96■□□□□ 0.47
Gm10226O88253 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10226O88253 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm10226O88253 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.95■□□□□ 0.46
Gm10226O88253 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm10226O88253 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm10226O88253 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm10226O88253 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Gm10226O88253 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm10226O88253 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm10226O88253 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm10226O88253 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm10226O88253 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm10226O88253 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.94■□□□□ 0.46
Gm10226O88253 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.94■□□□□ 0.46
Gm10226O88253 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Gm10226O88253 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10226O88253 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.93■□□□□ 0.46
Gm10226O88253 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10226O88253 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10226O88253 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10226O88253 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10226O88253 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10226O88253 Mir6538-201ENSMUST00000183713 110 ntBASIC17.92■□□□□ 0.46
Gm10226O88253 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10226O88253 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10226O88253 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10226O88253 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10226O88253 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10226O88253 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gm10226O88253 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm10226O88253 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gm10226O88253 Scarna2-201ENSMUST00000157560 414 ntBASIC17.91■□□□□ 0.46
Gm10226O88253 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10226O88253 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10226O88253 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms