Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Lsm2O35900 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm2O35900 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm2O35900 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm2O35900 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm2O35900 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.82■□□□□ 0.92
Lsm2O35900 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm2O35900 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm2O35900 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.82■□□□□ 0.92
Lsm2O35900 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lsm2O35900 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm2O35900 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm2O35900 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm2O35900 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lsm2O35900 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm2O35900 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm2O35900 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm2O35900 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm2O35900 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lsm2O35900 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm2O35900 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Lsm2O35900 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.77■□□□□ 0.92
Lsm2O35900 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.77■□□□□ 0.92
Lsm2O35900 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm2O35900 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm2O35900 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lsm2O35900 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lsm2O35900 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lsm2O35900 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm2O35900 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm2O35900 Gm16148-201ENSMUST00000119653 893 ntBASIC20.76■□□□□ 0.91
Lsm2O35900 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.76■□□□□ 0.91
Lsm2O35900 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm2O35900 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm2O35900 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm2O35900 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.75■□□□□ 0.91
Lsm2O35900 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm2O35900 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm2O35900 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lsm2O35900 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lsm2O35900 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm2O35900 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm2O35900 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm2O35900 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm2O35900 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm2O35900 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Lsm2O35900 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Lsm2O35900 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm2O35900 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm2O35900 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm2O35900 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
Lsm2O35900 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.73■□□□□ 0.91
Lsm2O35900 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm2O35900 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm2O35900 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm2O35900 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm2O35900 Particl-201ENSMUST00000205370 1560 ntBASIC20.72■□□□□ 0.91
Lsm2O35900 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Lsm2O35900 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lsm2O35900 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm2O35900 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm2O35900 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Lsm2O35900 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm2O35900 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm2O35900 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm2O35900 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm2O35900 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm2O35900 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.7■□□□□ 0.9
Lsm2O35900 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm2O35900 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm2O35900 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm2O35900 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lsm2O35900 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lsm2O35900 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm2O35900 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm2O35900 Gm24804-201ENSMUST00000174982 85 ntBASIC20.68■□□□□ 0.9
Lsm2O35900 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm2O35900 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm2O35900 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm2O35900 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Lsm2O35900 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm2O35900 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm2O35900 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm2O35900 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm2O35900 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.66■□□□□ 0.9
Lsm2O35900 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm2O35900 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.66■□□□□ 0.9
Lsm2O35900 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm2O35900 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm2O35900 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm2O35900 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.65■□□□□ 0.9
Lsm2O35900 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Lsm2O35900 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Lsm2O35900 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm2O35900 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm2O35900 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Lsm2O35900 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.64■□□□□ 0.9
Lsm2O35900 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm2O35900 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm2O35900 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms