Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clk3O35492 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clk3O35492 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Clk3O35492 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clk3O35492 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clk3O35492 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Clk3O35492 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Clk3O35492 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Clk3O35492 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Clk3O35492 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.88■■□□□ 1.09
Clk3O35492 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.88■■□□□ 1.09
Clk3O35492 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Clk3O35492 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Clk3O35492 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Clk3O35492 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clk3O35492 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.86■■□□□ 1.09
Clk3O35492 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Clk3O35492 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clk3O35492 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clk3O35492 Gm6821-201ENSMUST00000107540 542 ntBASIC21.85■■□□□ 1.09
Clk3O35492 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Clk3O35492 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Clk3O35492 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Clk3O35492 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Clk3O35492 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clk3O35492 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Clk3O35492 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Clk3O35492 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.83■■□□□ 1.08
Clk3O35492 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clk3O35492 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clk3O35492 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Clk3O35492 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.81■■□□□ 1.08
Clk3O35492 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Clk3O35492 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.81■■□□□ 1.08
Clk3O35492 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Clk3O35492 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Clk3O35492 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clk3O35492 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clk3O35492 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Clk3O35492 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.8■■□□□ 1.08
Clk3O35492 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clk3O35492 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clk3O35492 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Clk3O35492 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Clk3O35492 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clk3O35492 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.79■■□□□ 1.08
Clk3O35492 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Clk3O35492 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clk3O35492 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clk3O35492 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clk3O35492 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Clk3O35492 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clk3O35492 Gm30023-201ENSMUST00000197970 889 ntBASIC21.78■■□□□ 1.08
Clk3O35492 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clk3O35492 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clk3O35492 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clk3O35492 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clk3O35492 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
Clk3O35492 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Clk3O35492 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Clk3O35492 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clk3O35492 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clk3O35492 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clk3O35492 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clk3O35492 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clk3O35492 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Clk3O35492 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clk3O35492 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.73■■□□□ 1.07
Clk3O35492 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clk3O35492 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clk3O35492 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clk3O35492 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clk3O35492 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Clk3O35492 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clk3O35492 Gm8503-201ENSMUST00000118131 455 ntBASIC21.72■■□□□ 1.07
Clk3O35492 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clk3O35492 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Clk3O35492 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clk3O35492 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Clk3O35492 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clk3O35492 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.7■■□□□ 1.06
Clk3O35492 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Clk3O35492 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clk3O35492 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clk3O35492 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.68■■□□□ 1.06
Clk3O35492 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.68■■□□□ 1.06
Clk3O35492 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.68■■□□□ 1.06
Clk3O35492 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clk3O35492 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clk3O35492 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clk3O35492 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clk3O35492 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Clk3O35492 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms