Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6bO35451 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6bO35451 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6bO35451 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6bO35451 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6bO35451 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Atf6bO35451 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6bO35451 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6bO35451 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Atf6bO35451 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6bO35451 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6bO35451 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6bO35451 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6bO35451 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.96■□□□□ 0.79
Atf6bO35451 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.96■□□□□ 0.79
Atf6bO35451 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6bO35451 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6bO35451 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atf6bO35451 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Atf6bO35451 Gm11599-201ENSMUST00000118720 878 ntBASIC19.95■□□□□ 0.78
Atf6bO35451 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.95■□□□□ 0.78
Atf6bO35451 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atf6bO35451 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.94■□□□□ 0.78
Atf6bO35451 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6bO35451 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6bO35451 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.92■□□□□ 0.78
Atf6bO35451 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6bO35451 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6bO35451 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6bO35451 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6bO35451 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Atf6bO35451 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atf6bO35451 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf6bO35451 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Atf6bO35451 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atf6bO35451 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atf6bO35451 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atf6bO35451 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6bO35451 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6bO35451 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Atf6bO35451 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6bO35451 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Atf6bO35451 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf6bO35451 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.86■□□□□ 0.77
Atf6bO35451 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atf6bO35451 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.85■□□□□ 0.77
Atf6bO35451 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atf6bO35451 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Atf6bO35451 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.85■□□□□ 0.77
Atf6bO35451 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf6bO35451 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf6bO35451 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf6bO35451 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atf6bO35451 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf6bO35451 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf6bO35451 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Atf6bO35451 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Atf6bO35451 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Atf6bO35451 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.82■□□□□ 0.76
Atf6bO35451 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Atf6bO35451 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atf6bO35451 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf6bO35451 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf6bO35451 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Atf6bO35451 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf6bO35451 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf6bO35451 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf6bO35451 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atf6bO35451 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atf6bO35451 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atf6bO35451 Gm37136-201ENSMUST00000194368 194 ntBASIC19.79■□□□□ 0.76
Atf6bO35451 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atf6bO35451 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atf6bO35451 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atf6bO35451 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.79■□□□□ 0.76
Atf6bO35451 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.79■□□□□ 0.76
Atf6bO35451 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atf6bO35451 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Atf6bO35451 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atf6bO35451 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Atf6bO35451 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atf6bO35451 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.78■□□□□ 0.76
Atf6bO35451 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Atf6bO35451 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atf6bO35451 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.78■□□□□ 0.76
Atf6bO35451 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.77■□□□□ 0.76
Atf6bO35451 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Atf6bO35451 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6bO35451 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6bO35451 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6bO35451 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6bO35451 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6bO35451 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6bO35451 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6bO35451 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6bO35451 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6bO35451 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6bO35451 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6bO35451 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Atf6bO35451 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms