Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gfra3O35118 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.05■□□□□ 0.8
Gfra3O35118 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.05■□□□□ 0.8
Gfra3O35118 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gfra3O35118 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.05■□□□□ 0.8
Gfra3O35118 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gfra3O35118 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gfra3O35118 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gfra3O35118 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gfra3O35118 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gfra3O35118 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gfra3O35118 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gfra3O35118 Gm11175-201ENSMUST00000116172 543 ntBASIC20.01■□□□□ 0.79
Gfra3O35118 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.01■□□□□ 0.79
Gfra3O35118 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gfra3O35118 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gfra3O35118 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.01■□□□□ 0.79
Gfra3O35118 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20■□□□□ 0.79
Gfra3O35118 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gfra3O35118 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gfra3O35118 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gfra3O35118 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gfra3O35118 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gfra3O35118 Mir3960-201ENSMUST00000198213 73 ntBASIC19.99■□□□□ 0.79
Gfra3O35118 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.99■□□□□ 0.79
Gfra3O35118 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.99■□□□□ 0.79
Gfra3O35118 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.99■□□□□ 0.79
Gfra3O35118 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Gfra3O35118 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gfra3O35118 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gfra3O35118 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gfra3O35118 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gfra3O35118 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Gfra3O35118 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gfra3O35118 Gm45364-201ENSMUST00000210883 159 ntBASIC19.96■□□□□ 0.79
Gfra3O35118 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.95■□□□□ 0.79
Gfra3O35118 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.95■□□□□ 0.79
Gfra3O35118 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gfra3O35118 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gfra3O35118 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gfra3O35118 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.94■□□□□ 0.78
Gfra3O35118 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gfra3O35118 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gfra3O35118 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gfra3O35118 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.92■□□□□ 0.78
Gfra3O35118 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Gfra3O35118 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gfra3O35118 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gfra3O35118 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gfra3O35118 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gfra3O35118 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gfra3O35118 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gfra3O35118 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfra3O35118 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfra3O35118 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Gfra3O35118 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gfra3O35118 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfra3O35118 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gfra3O35118 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfra3O35118 Mir6538-201ENSMUST00000183713 110 ntBASIC19.89■□□□□ 0.77
Gfra3O35118 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gfra3O35118 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gfra3O35118 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gfra3O35118 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gfra3O35118 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gfra3O35118 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Gfra3O35118 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gfra3O35118 Scarna2-201ENSMUST00000157560 414 ntBASIC19.88■□□□□ 0.77
Gfra3O35118 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gfra3O35118 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.87■□□□□ 0.77
Gfra3O35118 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gfra3O35118 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gfra3O35118 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
Gfra3O35118 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gfra3O35118 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gfra3O35118 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gfra3O35118 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.86■□□□□ 0.77
Gfra3O35118 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gfra3O35118 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.86■□□□□ 0.77
Gfra3O35118 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gfra3O35118 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gfra3O35118 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gfra3O35118 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gfra3O35118 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gfra3O35118 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gfra3O35118 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.85■□□□□ 0.77
Gfra3O35118 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Gfra3O35118 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Gfra3O35118 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gfra3O35118 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.84■□□□□ 0.77
Gfra3O35118 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gfra3O35118 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.83■□□□□ 0.77
Gfra3O35118 Gm9806-201ENSMUST00000051080 552 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms