Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.74■□□□□ 0.91
Raet1cO08604 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Raet1cO08604 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Raet1cO08604 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Raet1cO08604 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Raet1cO08604 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Raet1cO08604 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Raet1cO08604 Particl-201ENSMUST00000205370 1560 ntBASIC20.71■□□□□ 0.91
Raet1cO08604 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Raet1cO08604 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Raet1cO08604 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Raet1cO08604 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Raet1cO08604 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Raet1cO08604 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Raet1cO08604 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Raet1cO08604 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Raet1cO08604 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Raet1cO08604 Gm8503-201ENSMUST00000118131 455 ntBASIC20.68■□□□□ 0.9
Raet1cO08604 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Raet1cO08604 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.68■□□□□ 0.9
Raet1cO08604 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Raet1cO08604 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.67■□□□□ 0.9
Raet1cO08604 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Raet1cO08604 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raet1cO08604 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raet1cO08604 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raet1cO08604 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Raet1cO08604 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raet1cO08604 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Raet1cO08604 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.65■□□□□ 0.9
Raet1cO08604 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raet1cO08604 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Raet1cO08604 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Raet1cO08604 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Raet1cO08604 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Raet1cO08604 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.64■□□□□ 0.89
Raet1cO08604 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Raet1cO08604 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Raet1cO08604 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Raet1cO08604 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Raet1cO08604 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Raet1cO08604 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Raet1cO08604 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raet1cO08604 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raet1cO08604 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raet1cO08604 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Raet1cO08604 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raet1cO08604 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Raet1cO08604 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Raet1cO08604 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raet1cO08604 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Raet1cO08604 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raet1cO08604 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raet1cO08604 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raet1cO08604 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raet1cO08604 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raet1cO08604 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.57■□□□□ 0.88
Raet1cO08604 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raet1cO08604 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Raet1cO08604 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Raet1cO08604 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Raet1cO08604 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Raet1cO08604 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raet1cO08604 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Raet1cO08604 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raet1cO08604 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raet1cO08604 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.54■□□□□ 0.88
Raet1cO08604 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Raet1cO08604 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Raet1cO08604 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Raet1cO08604 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Raet1cO08604 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Raet1cO08604 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Raet1cO08604 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Raet1cO08604 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Raet1cO08604 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Raet1cO08604 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Raet1cO08604 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Raet1cO08604 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Raet1cO08604 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Raet1cO08604 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Raet1cO08604 Gm37136-201ENSMUST00000194368 194 ntBASIC20.51■□□□□ 0.87
Raet1cO08604 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Raet1cO08604 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Raet1cO08604 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Raet1cO08604 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.5■□□□□ 0.87
Raet1cO08604 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Raet1cO08604 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Raet1cO08604 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Raet1cO08604 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Raet1cO08604 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raet1cO08604 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raet1cO08604 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raet1cO08604 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Raet1cO08604 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Raet1cO08604 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Raet1cO08604 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raet1cO08604 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raet1cO08604 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Raet1cO08604 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms