Protein–RNA interactions for Protein: L7N2C0

Gm6401, Predicted gene 6401 (Fragment), mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6401L7N2C0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm6401L7N2C0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm6401L7N2C0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm6401L7N2C0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm6401L7N2C0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm6401L7N2C0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm6401L7N2C0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Gm6401L7N2C0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm6401L7N2C0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Gm6401L7N2C0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Gm6401L7N2C0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Gm6401L7N2C0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm6401L7N2C0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Gm6401L7N2C0 Gm24804-201ENSMUST00000174982 85 ntBASIC20.51■□□□□ 0.87
Gm6401L7N2C0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm6401L7N2C0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm6401L7N2C0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm6401L7N2C0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Gm6401L7N2C0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm6401L7N2C0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm6401L7N2C0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm6401L7N2C0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm6401L7N2C0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm6401L7N2C0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gm6401L7N2C0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Gm6401L7N2C0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm6401L7N2C0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm6401L7N2C0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm6401L7N2C0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.49■□□□□ 0.87
Gm6401L7N2C0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm6401L7N2C0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Gm6401L7N2C0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm6401L7N2C0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm6401L7N2C0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm6401L7N2C0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm6401L7N2C0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm6401L7N2C0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm6401L7N2C0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm6401L7N2C0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm6401L7N2C0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm6401L7N2C0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm6401L7N2C0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm6401L7N2C0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Gm6401L7N2C0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gm6401L7N2C0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm6401L7N2C0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm6401L7N2C0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm6401L7N2C0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gm6401L7N2C0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm6401L7N2C0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm6401L7N2C0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm6401L7N2C0 Gm16148-201ENSMUST00000119653 893 ntBASIC20.42■□□□□ 0.86
Gm6401L7N2C0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm6401L7N2C0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Gm6401L7N2C0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm6401L7N2C0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm6401L7N2C0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm6401L7N2C0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm6401L7N2C0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.41■□□□□ 0.86
Gm6401L7N2C0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Gm6401L7N2C0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm6401L7N2C0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm6401L7N2C0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm6401L7N2C0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Gm6401L7N2C0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm6401L7N2C0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Gm6401L7N2C0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm6401L7N2C0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm6401L7N2C0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Gm6401L7N2C0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm6401L7N2C0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm6401L7N2C0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm6401L7N2C0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm6401L7N2C0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm6401L7N2C0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gm6401L7N2C0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm6401L7N2C0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm6401L7N2C0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm6401L7N2C0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Gm6401L7N2C0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm6401L7N2C0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm6401L7N2C0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm6401L7N2C0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm6401L7N2C0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.35■□□□□ 0.85
Gm6401L7N2C0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm6401L7N2C0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm6401L7N2C0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm6401L7N2C0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Gm6401L7N2C0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gm6401L7N2C0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm6401L7N2C0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm6401L7N2C0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms