Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
B020004C17RikJ3QP07 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 Gm14523-201ENSMUST00000117260 558 ntBASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
B020004C17RikJ3QP07 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
B020004C17RikJ3QP07 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
B020004C17RikJ3QP07 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
B020004C17RikJ3QP07 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
B020004C17RikJ3QP07 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
B020004C17RikJ3QP07 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
B020004C17RikJ3QP07 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
B020004C17RikJ3QP07 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.77■■□□□ 1.88
B020004C17RikJ3QP07 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
B020004C17RikJ3QP07 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.88
B020004C17RikJ3QP07 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
B020004C17RikJ3QP07 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
B020004C17RikJ3QP07 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
B020004C17RikJ3QP07 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
B020004C17RikJ3QP07 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.72■■□□□ 1.87
B020004C17RikJ3QP07 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
B020004C17RikJ3QP07 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Zxda-201ENSMUST00000117281 2621 ntBASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
B020004C17RikJ3QP07 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
B020004C17RikJ3QP07 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
B020004C17RikJ3QP07 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
B020004C17RikJ3QP07 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
B020004C17RikJ3QP07 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.65■■□□□ 1.86
B020004C17RikJ3QP07 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
B020004C17RikJ3QP07 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
B020004C17RikJ3QP07 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.64■■□□□ 1.86
B020004C17RikJ3QP07 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
B020004C17RikJ3QP07 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
B020004C17RikJ3QP07 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
B020004C17RikJ3QP07 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
B020004C17RikJ3QP07 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
B020004C17RikJ3QP07 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.61■■□□□ 1.85
B020004C17RikJ3QP07 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
B020004C17RikJ3QP07 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
B020004C17RikJ3QP07 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
B020004C17RikJ3QP07 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.59■■□□□ 1.85
B020004C17RikJ3QP07 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
B020004C17RikJ3QP07 Gm10420-201ENSMUST00000121713 882 ntBASIC26.58■■□□□ 1.85
B020004C17RikJ3QP07 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
B020004C17RikJ3QP07 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
B020004C17RikJ3QP07 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
B020004C17RikJ3QP07 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
B020004C17RikJ3QP07 Terc-201ENSMUST00000082862 423 ntBASIC26.55■■□□□ 1.84
B020004C17RikJ3QP07 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
B020004C17RikJ3QP07 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
B020004C17RikJ3QP07 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.54■■□□□ 1.84
B020004C17RikJ3QP07 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
B020004C17RikJ3QP07 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
B020004C17RikJ3QP07 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
B020004C17RikJ3QP07 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
B020004C17RikJ3QP07 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
B020004C17RikJ3QP07 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms