Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav13d-3J3QMG8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav13d-3J3QMG8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav13d-3J3QMG8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav13d-3J3QMG8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav13d-3J3QMG8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav13d-3J3QMG8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav13d-3J3QMG8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav13d-3J3QMG8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav13d-3J3QMG8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Trav13d-3J3QMG8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav13d-3J3QMG8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav13d-3J3QMG8 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.46■□□□□ 0.87
Trav13d-3J3QMG8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav13d-3J3QMG8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav13d-3J3QMG8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav13d-3J3QMG8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trav13d-3J3QMG8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav13d-3J3QMG8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav13d-3J3QMG8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav13d-3J3QMG8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav13d-3J3QMG8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav13d-3J3QMG8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav13d-3J3QMG8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav13d-3J3QMG8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav13d-3J3QMG8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav13d-3J3QMG8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav13d-3J3QMG8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav13d-3J3QMG8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav13d-3J3QMG8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Trav13d-3J3QMG8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav13d-3J3QMG8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav13d-3J3QMG8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav13d-3J3QMG8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Trav13d-3J3QMG8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav13d-3J3QMG8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13d-3J3QMG8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13d-3J3QMG8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.4■□□□□ 0.86
Trav13d-3J3QMG8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13d-3J3QMG8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13d-3J3QMG8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13d-3J3QMG8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13d-3J3QMG8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav13d-3J3QMG8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav13d-3J3QMG8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav13d-3J3QMG8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav13d-3J3QMG8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav13d-3J3QMG8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav13d-3J3QMG8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav13d-3J3QMG8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trav13d-3J3QMG8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trav13d-3J3QMG8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav13d-3J3QMG8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav13d-3J3QMG8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav13d-3J3QMG8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav13d-3J3QMG8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav13d-3J3QMG8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav13d-3J3QMG8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.36■□□□□ 0.85
Trav13d-3J3QMG8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav13d-3J3QMG8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav13d-3J3QMG8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav13d-3J3QMG8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav13d-3J3QMG8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav13d-3J3QMG8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.35■□□□□ 0.85
Trav13d-3J3QMG8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
Trav13d-3J3QMG8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav13d-3J3QMG8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav13d-3J3QMG8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav13d-3J3QMG8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav13d-3J3QMG8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav13d-3J3QMG8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trav13d-3J3QMG8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav13d-3J3QMG8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav13d-3J3QMG8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.32■□□□□ 0.84
Trav13d-3J3QMG8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.32■□□□□ 0.84
Trav13d-3J3QMG8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav13d-3J3QMG8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13d-3J3QMG8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13d-3J3QMG8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13d-3J3QMG8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13d-3J3QMG8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13d-3J3QMG8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav13d-3J3QMG8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav13d-3J3QMG8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav13d-3J3QMG8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav13d-3J3QMG8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.29■□□□□ 0.84
Trav13d-3J3QMG8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.29■□□□□ 0.84
Trav13d-3J3QMG8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav13d-3J3QMG8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav13d-3J3QMG8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav13d-3J3QMG8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.28■□□□□ 0.84
Trav13d-3J3QMG8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trav13d-3J3QMG8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav13d-3J3QMG8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav13d-3J3QMG8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav13d-3J3QMG8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav13d-3J3QMG8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav13d-3J3QMG8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav13d-3J3QMG8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav13d-3J3QMG8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms