Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chd6A3KFM7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd6A3KFM7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chd6A3KFM7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.78■□□□□ 0.76
Chd6A3KFM7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.78■□□□□ 0.76
Chd6A3KFM7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd6A3KFM7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.78■□□□□ 0.76
Chd6A3KFM7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd6A3KFM7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd6A3KFM7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd6A3KFM7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd6A3KFM7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd6A3KFM7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd6A3KFM7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.77■□□□□ 0.76
Chd6A3KFM7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Chd6A3KFM7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd6A3KFM7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd6A3KFM7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.76■□□□□ 0.75
Chd6A3KFM7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd6A3KFM7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd6A3KFM7 Mir3960-201ENSMUST00000198213 73 ntBASIC19.75■□□□□ 0.75
Chd6A3KFM7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.75■□□□□ 0.75
Chd6A3KFM7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd6A3KFM7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chd6A3KFM7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd6A3KFM7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd6A3KFM7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd6A3KFM7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.73■□□□□ 0.75
Chd6A3KFM7 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.72■□□□□ 0.75
Chd6A3KFM7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd6A3KFM7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd6A3KFM7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd6A3KFM7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
Chd6A3KFM7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd6A3KFM7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.69■□□□□ 0.74
Chd6A3KFM7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd6A3KFM7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.68■□□□□ 0.74
Chd6A3KFM7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd6A3KFM7 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.68■□□□□ 0.74
Chd6A3KFM7 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.68■□□□□ 0.74
Chd6A3KFM7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd6A3KFM7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd6A3KFM7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.67■□□□□ 0.74
Chd6A3KFM7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd6A3KFM7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd6A3KFM7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd6A3KFM7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd6A3KFM7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd6A3KFM7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd6A3KFM7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd6A3KFM7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.65■□□□□ 0.74
Chd6A3KFM7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.65■□□□□ 0.74
Chd6A3KFM7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd6A3KFM7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.64■□□□□ 0.73
Chd6A3KFM7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd6A3KFM7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd6A3KFM7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd6A3KFM7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd6A3KFM7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chd6A3KFM7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd6A3KFM7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd6A3KFM7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd6A3KFM7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd6A3KFM7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Chd6A3KFM7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd6A3KFM7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chd6A3KFM7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd6A3KFM7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd6A3KFM7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd6A3KFM7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd6A3KFM7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd6A3KFM7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.6■□□□□ 0.73
Chd6A3KFM7 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.6■□□□□ 0.73
Chd6A3KFM7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd6A3KFM7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Chd6A3KFM7 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.59■□□□□ 0.73
Chd6A3KFM7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd6A3KFM7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.58■□□□□ 0.73
Chd6A3KFM7 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.57■□□□□ 0.72
Chd6A3KFM7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chd6A3KFM7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd6A3KFM7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd6A3KFM7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.56■□□□□ 0.72
Chd6A3KFM7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd6A3KFM7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Chd6A3KFM7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd6A3KFM7 Gm43566-201ENSMUST00000196851 808 ntBASIC19.55■□□□□ 0.72
Chd6A3KFM7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd6A3KFM7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.55■□□□□ 0.72
Chd6A3KFM7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd6A3KFM7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.54■□□□□ 0.72
Chd6A3KFM7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.54■□□□□ 0.72
Chd6A3KFM7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd6A3KFM7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd6A3KFM7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd6A3KFM7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Chd6A3KFM7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd6A3KFM7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.53■□□□□ 0.72
Chd6A3KFM7 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.53■□□□□ 0.72
Chd6A3KFM7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms