Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ubr4A2AN08 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ubr4A2AN08 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubr4A2AN08 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.02□□□□□ -0.32
Ubr4A2AN08 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.02□□□□□ -0.32
Ubr4A2AN08 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubr4A2AN08 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubr4A2AN08 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ubr4A2AN08 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.02□□□□□ -0.33
Ubr4A2AN08 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubr4A2AN08 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubr4A2AN08 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.01□□□□□ -0.33
Ubr4A2AN08 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubr4A2AN08 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC13.01□□□□□ -0.33
Ubr4A2AN08 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr4A2AN08 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr4A2AN08 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr4A2AN08 Gm22325-201ENSMUST00000158904 308 ntBASIC12.99□□□□□ -0.33
Ubr4A2AN08 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.99□□□□□ -0.33
Ubr4A2AN08 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr4A2AN08 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr4A2AN08 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr4A2AN08 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC12.98□□□□□ -0.33
Ubr4A2AN08 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.98□□□□□ -0.33
Ubr4A2AN08 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr4A2AN08 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC12.98□□□□□ -0.33
Ubr4A2AN08 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr4A2AN08 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr4A2AN08 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC12.97□□□□□ -0.33
Ubr4A2AN08 Gm27011-201ENSMUST00000182352 972 ntBASIC12.96□□□□□ -0.33
Ubr4A2AN08 AC116713.1-201ENSMUST00000215074 430 ntBASIC12.96□□□□□ -0.33
Ubr4A2AN08 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.96□□□□□ -0.33
Ubr4A2AN08 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.96□□□□□ -0.33
Ubr4A2AN08 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubr4A2AN08 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubr4A2AN08 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubr4A2AN08 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ubr4A2AN08 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubr4A2AN08 Gm21956-201ENSMUST00000179946 522 ntBASIC12.93□□□□□ -0.34
Ubr4A2AN08 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubr4A2AN08 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubr4A2AN08 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubr4A2AN08 Mir3960-201ENSMUST00000198213 73 ntBASIC12.93□□□□□ -0.34
Ubr4A2AN08 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.92□□□□□ -0.34
Ubr4A2AN08 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubr4A2AN08 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.92□□□□□ -0.34
Ubr4A2AN08 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubr4A2AN08 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ubr4A2AN08 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubr4A2AN08 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubr4A2AN08 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubr4A2AN08 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.91□□□□□ -0.34
Ubr4A2AN08 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubr4A2AN08 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubr4A2AN08 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubr4A2AN08 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubr4A2AN08 Gm13889-201ENSMUST00000099689 1386 ntBASIC12.91□□□□□ -0.34
Ubr4A2AN08 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubr4A2AN08 Gm9910-201ENSMUST00000195385 1550 ntBASIC12.9□□□□□ -0.34
Ubr4A2AN08 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubr4A2AN08 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubr4A2AN08 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubr4A2AN08 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubr4A2AN08 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC12.9□□□□□ -0.34
Ubr4A2AN08 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubr4A2AN08 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubr4A2AN08 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubr4A2AN08 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr4A2AN08 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr4A2AN08 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ubr4A2AN08 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr4A2AN08 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.88□□□□□ -0.35
Ubr4A2AN08 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ubr4A2AN08 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr4A2AN08 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr4A2AN08 Etf1-202ENSMUST00000180351 108 ntBASIC12.87□□□□□ -0.35
Ubr4A2AN08 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.87□□□□□ -0.35
Ubr4A2AN08 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr4A2AN08 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr4A2AN08 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr4A2AN08 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr4A2AN08 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ubr4A2AN08 Gm8495-201ENSMUST00000188740 694 ntBASIC12.86□□□□□ -0.35
Ubr4A2AN08 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr4A2AN08 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubr4A2AN08 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.85□□□□□ -0.35
Ubr4A2AN08 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC12.85□□□□□ -0.35
Ubr4A2AN08 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ubr4A2AN08 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
Ubr4A2AN08 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubr4A2AN08 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubr4A2AN08 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ubr4A2AN08 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms