Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IsxA1A546 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
IsxA1A546 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IsxA1A546 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IsxA1A546 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.59■■□□□ 1.05
IsxA1A546 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IsxA1A546 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IsxA1A546 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IsxA1A546 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IsxA1A546 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IsxA1A546 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.58■■□□□ 1.05
IsxA1A546 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.58■■□□□ 1.05
IsxA1A546 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IsxA1A546 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IsxA1A546 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IsxA1A546 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
IsxA1A546 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IsxA1A546 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IsxA1A546 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.57■■□□□ 1.04
IsxA1A546 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.57■■□□□ 1.04
IsxA1A546 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IsxA1A546 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IsxA1A546 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IsxA1A546 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IsxA1A546 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
IsxA1A546 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IsxA1A546 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IsxA1A546 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IsxA1A546 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IsxA1A546 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
IsxA1A546 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IsxA1A546 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IsxA1A546 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IsxA1A546 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IsxA1A546 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IsxA1A546 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IsxA1A546 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IsxA1A546 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IsxA1A546 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IsxA1A546 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.51■■□□□ 1.03
IsxA1A546 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
IsxA1A546 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.51■■□□□ 1.03
IsxA1A546 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
IsxA1A546 Zfp131-205ENSMUST00000223812 663 ntBASIC21.51■■□□□ 1.03
IsxA1A546 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
IsxA1A546 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
IsxA1A546 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IsxA1A546 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IsxA1A546 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IsxA1A546 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IsxA1A546 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IsxA1A546 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
IsxA1A546 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IsxA1A546 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
IsxA1A546 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
IsxA1A546 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
IsxA1A546 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
IsxA1A546 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
IsxA1A546 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
IsxA1A546 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IsxA1A546 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IsxA1A546 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IsxA1A546 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IsxA1A546 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IsxA1A546 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
IsxA1A546 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IsxA1A546 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IsxA1A546 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
IsxA1A546 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IsxA1A546 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
IsxA1A546 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IsxA1A546 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IsxA1A546 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
IsxA1A546 Gm16148-201ENSMUST00000119653 893 ntBASIC21.43■■□□□ 1.02
IsxA1A546 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IsxA1A546 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IsxA1A546 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
IsxA1A546 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
IsxA1A546 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IsxA1A546 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IsxA1A546 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
IsxA1A546 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
IsxA1A546 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IsxA1A546 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IsxA1A546 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IsxA1A546 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IsxA1A546 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
IsxA1A546 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IsxA1A546 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IsxA1A546 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IsxA1A546 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IsxA1A546 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IsxA1A546 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IsxA1A546 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IsxA1A546 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
IsxA1A546 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
IsxA1A546 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IsxA1A546 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
IsxA1A546 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
IsxA1A546 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms